* Fix and improve Galaxy root option specification options. `Pull Request 701`_, 8a608e0_ * Update `planemo mull` to use a default action of `build-and-test` since `build` no longer cleans up itself. ecc1bc2_ * Add a command to pre-install Involucro_. `Pull Request 702`_
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0.43.0
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* Remove stdio from generated tools - just use exit_code for everything. 91b6fa0_ * Implement some ad-hoc documentation tests. `Pull Request 699`_ * A large number of small enhancements and fixes for the documentation and example projects.
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0.42.1
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* Fix Readme typos (thanks to `manabuishii`_) 904d77a_ * Fix `container_register` to create pull requests against the newly finalized home of the multi-package-containers registry repository. 9636682_ * Fix `use_global_config` and `use_env_var` for options with unspecified defaults. 475104c_
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0.42.0
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* Conda/Container documentation and option naming improvements. `Pull Request 684`_ * Sync `galaxy.xsd` with latest upstream Galaxy updates (thanks to `nsoranzo`_). `Pull Request 687`_ * Fix `ci_find_repos` command to not filter repos whose only modifications where in subdirs (thanks to `nsoranzo`_). `Pull Request 688`_ * Update `container_register` for mulled version 2 and repository name changes. `Pull Request 689`_ * Better pull request messages for the `container_register` command. `Pull Request 690`_
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0.41.0
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* Fix ``shed_update`` not fail if there is nothing to update (thanks to `nsoranzo`_). `Issue 494`_, `Pull Request 680`_ * Conda documentation and option naming improvements. `Pull Request 683`_ * Implement ``container_register`` for tool repositories. `Pull Request 675`_ * Fix ``hub`` binary installation for Mac OS X. `Pull Request 682`_
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0.40.1
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* Fix data manager configuration to not conflict with original Galaxy at ``galaxy_root`` (thanks to `nsoranzo`_). `Pull Request 662`_ * Fix ``filter_paths()`` to not partial match paths when filtering shed repositories (thanks to `nsoranzo`_). `Pull Request 665`_ * Fix description when creating ``.shed.yml`` files (thanks to `RJMW`_). `Pull Request 664`_