Dark-matter

Latest version: v4.0.81

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Page 29 of 43

Added extremely basic `bin/describe-protein-database.py` command. To be
added to.

Not secure

Added taxonomy info to HTML output.

Not secure

Removed unguarded call to `self.pathogenPanel` that should have been
deleted on the last commit in `dark.civ.proteins.py` `toHTML` method.

Not secure

Don't try to make a pathogen panel (in the `dark.civ.proteins.py` `toHTML`
method) if no pathogens were matched.

Not secure

Fixed old code in `toStr`.

Not secure

Fixed args in call to `toStr` in `proteins-to-pathogens-civ.py`.

Has known vulnerabilities

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