Renamed `bin/genbank-to-fasta.py` to `bin/genbank-grep.py` and made it able to print in GenBank format as well as FASTA.
4.0.26
Not secure
Added `bin/genbank-to-fasta.py` to extract FASTA from GenBank flat files.
4.0.25
Not secure
Added `findORF` method to `DNARead` and `edlib` as an aligner option to `compare-sequences.py`.
4.0.24
Not secure
Added `--format` option to `ncbi-fetch-id.py` to allow fetching of GenBank format flat files (use `--format gb`).
4.0.23
Not secure
Removed a second unneeded viral check from `dark/taxonomy.py`.
4.0.22
Not secure
Removed unneeded viral check from `dark/taxonomy.py`. Added 'generic' as a pathogen type for protein reporting (in `dark/civ/proteins.py`) and that can be given to `bin/proteins-to-pathogens-civ.py`.