Vitessce

Minor Changes

- Use Zarrita.js rather than ZarrJS to load Zarr data. (This change is needed to support Zarr features that are required for SpatialData but are not available in ZarrJS.) (`vitessce/spatial-utils`, `vitessce/zarr-utils`, `vitessce/json`, `vitessce/zarr`, `vitessce/gl`) ([1693](https://github.com/vitessce/vitessce/pull/1693))

Patch Changes

- Types-only package. (`vitessce/types`) ([1708](https://github.com/vitessce/vitessce/pull/1708))

- TypeScript types for vitessce/utils sub-package. (`vitessce/utils`) ([1706](https://github.com/vitessce/vitessce/pull/1706))

- Upgrade cypress to fix https://github.com/cypress-io/cypress/issues/27804. (`demo`, `html`) ([#1703](https://github.com/vitessce/vitessce/pull/1703))

- Convert vitessce/constants-internal to TypeScript by changing file extensions. (`vitessce/constants-internal`) ([1701](https://github.com/vitessce/vitessce/pull/1701))

Patch Changes

- Implement a workaround to allow for plugin zod schemas to be used. (`vitessce/schemas`) ([1696](https://github.com/vitessce/vitessce/pull/1696))

- Upgrade Viv to get snapping scale bar. (`vitessce/spatial-beta`, `vitessce/spatial`, `vitessce/image-utils`, `vitessce/gl`) ([1691](https://github.com/vitessce/vitessce/pull/1691))

- Generate alt text based on existing view-types in config, add this to the VitessceGrid. (`vitessce/vit-s`) ([1695](https://github.com/vitessce/vitessce/pull/1695))

Patch Changes

- Use react-aria's useId hook to support React v17. (`vitessce/layer-controller-beta`, `vitessce/scatterplot-embedding`, `vitessce/scatterplot-gating`, `vitessce/statistical-plots`, `vitessce/layer-controller`, `vitessce/feature-list`, `vitessce/scatterplot`, `vitessce/heatmap`, `vitessce/spatial`, `vitessce/vit-s`) ([1687](https://github.com/vitessce/vitessce/pull/1687))

Minor Changes

- Added spatialBeta and layerControllerBeta views to support multi-obsType segmentations (`vitessce/layer-controller-beta`, `vitessce/spatial-beta`, `vitessce/vit-s`, `vitessce/gl`) ([1581](https://github.com/vitessce/vitessce/pull/1581))

Patch Changes

- Added support for SpatialData image elements by supporting proposed OME-NGFF new coordinateTransformations spec and using the temporary channels_metadata property. (`vitessce/spatial-utils`, `vitessce/zarr`) ([1664](https://github.com/vitessce/vitessce/pull/1664))

Patch Changes

- Use pluralize instead of plur package for pluralization. Wrap in vitessce/utils. (`vitessce/utils`) ([1638](https://github.com/vitessce/vitessce/pull/1638))

- Fix bug causing crash of Vitessce upon gene selection when earlier configs with both raster.json and expression data are used with pseudo-segmentation diamonds in the spatial view. (`vitessce/spatial`) ([1669](https://github.com/vitessce/vitessce/pull/1669))

- Display the image channel names in Spatial plot (`vitessce/spatial`) ([1647](https://github.com/vitessce/vitessce/pull/1647))

- Implemented expand/collapse button for vitessce.io (`docs`) ([1651](https://github.com/vitessce/vitessce/pull/1651))

- Improved accessibility of React components (`vitessce/scatterplot-embedding`, `vitessce/scatterplot-gating`, `vitessce/statistical-plots`, `vitessce/layer-controller`, `vitessce/feature-list`, `vitessce/scatterplot`, `vitessce/heatmap`, `vitessce/spatial`, `vitessce/tooltip`, `vitessce/vit-s`) ([1612](https://github.com/vitessce/vitessce/pull/1612))

- Fix bug causing crash during image channel name/color mapping for text rendering. (`vitessce/spatial`) ([1670](https://github.com/vitessce/vitessce/pull/1670))