Python

virtool-core

Latest version: v3.0.0

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3.0.0

[3.0.0](https://github.com/virtool/virtool-core/compare/2.40.0...3.0.0) (2022-11-26)


Bug Fixes

* remove reference field from `OTUSequence` ([bf90972](https://github.com/virtool/virtool-core/commit/bf9097278b08990f0c72fa99f1852b8cc6d7e562))


BREAKING CHANGES

* Replace usages of OTUSequence
with Sequence. OTUSequence is meant to be nested
in OTUs.

2.40.0

[2.40.0](https://github.com/virtool/virtool-core/compare/2.39.1...2.40.0) (2022-11-25)


Features

* add more fields to nested reference model ([db4131f](https://github.com/virtool/virtool-core/commit/db4131f25cce46d4c423b4462eac267be0a3ac4c))

2.39.1

[2.39.1](https://github.com/virtool/virtool-core/compare/2.39.0...2.39.1) (2022-11-23)


Bug Fixes

* patch vulnerability CVE-2007-4559 ([3a4b2fa](https://github.com/virtool/virtool-core/commit/3a4b2facbc362c20b689ac81e2e25884a204c908))

2.39.0

Not secure
[2.39.0](https://github.com/virtool/virtool-core/compare/2.38.0...2.39.0) (2022-11-10)


Features

* add model for instance messages ([b7ddce5](https://github.com/virtool/virtool-core/commit/b7ddce58bd47b083a675e47f2a5d14346dfb36fe))

2.38.0

Not secure
[2.38.0](https://github.com/virtool/virtool-core/compare/2.37.0...2.38.0) (2022-11-02)


Features

* add detailed nested task model ([a497595](https://github.com/virtool/virtool-core/commit/a497595c819d5ac41cf9a9c84b74828ad7a2bc30))

2.37.0

Not secure
[2.37.0](https://github.com/virtool/virtool-core/compare/2.36.2...2.37.0) (2022-10-24)


Features

* add session models ([3ebc495](https://github.com/virtool/virtool-core/commit/3ebc4952c771b2474f31ccd1d1236994e2860aff))

2.36.2

Not secure
[2.36.2](https://github.com/virtool/virtool-core/compare/2.36.1...2.36.2) (2022-10-14)


Bug Fixes

* make blast rid a string ([c3f4ee9](https://github.com/virtool/virtool-core/commit/c3f4ee90bbaaeef21dff64420aa81aa282456c57))

2.36.1

Not secure
[2.36.1](https://github.com/virtool/virtool-core/compare/2.36.0...2.36.1) (2022-10-14)


Bug Fixes

* use pydantic for blast model ([112e7c4](https://github.com/virtool/virtool-core/commit/112e7c4b5545e87ecc2bad64ce8d0d9f767d5582))

2.36.0

Not secure
[2.36.0](https://github.com/virtool/virtool-core/compare/2.35.0...2.36.0) (2022-10-14)


Features

* add nuvs blast model ([44848a1](https://github.com/virtool/virtool-core/commit/44848a1cb4837310affcd80bfdfea8e58c998872))

2.35.0

Not secure
[2.35.0](https://github.com/virtool/virtool-core/compare/2.34.0...2.35.0) (2022-10-12)


Features

* add ping field to job model ([fd752b0](https://github.com/virtool/virtool-core/commit/fd752b02d9dd43fe9b8f14666535b1f55c661539))

2.34.0

Not secure
[2.34.0](https://github.com/virtool/virtool-core/compare/2.33.6...2.34.0) (2022-10-04)


Features

* add active field to user data model ([3729b22](https://github.com/virtool/virtool-core/commit/3729b226bbb272a3c218f7ddc1c5486c1a1ba1de))

2.33.6

Not secure
[2.33.6](https://github.com/virtool/virtool-core/compare/2.33.5...2.33.6) (2022-09-29)


Bug Fixes

* make task step field optional ([0ec84be](https://github.com/virtool/virtool-core/commit/0ec84be19f1ceade33f920af91d90c5045359fb6))

2.33.5

Not secure
[2.33.5](https://github.com/virtool/virtool-core/compare/2.33.4...2.33.5) (2022-09-28)


Bug Fixes

* allow str and int for history index versions ([6f6c6e9](https://github.com/virtool/virtool-core/commit/6f6c6e9dbf99fa43ef10786cbfca803f8b858af2))

2.33.4

Not secure
[2.33.4](https://github.com/virtool/virtool-core/compare/2.33.3...2.33.4) (2022-09-27)


Bug Fixes

* correct reference models ([fea25e1](https://github.com/virtool/virtool-core/commit/fea25e13daa8a5576ccec9dc18a1dda01a9fbed2))

2.33.3

Not secure
[2.33.3](https://github.com/virtool/virtool-core/compare/2.33.2...2.33.3) (2022-09-26)


Bug Fixes

* prefer int typing for history otu version field ([c845ae6](https://github.com/virtool/virtool-core/commit/c845ae692215e0a3e6a83d909a0eb268028c1965))

2.33.2

Not secure
[2.33.2](https://github.com/virtool/virtool-core/compare/2.33.1...2.33.2) (2022-09-26)


Bug Fixes

* accept integer version for history otu model ([a4b4b57](https://github.com/virtool/virtool-core/commit/a4b4b57e1c805378674c7580f2848ac5cf492126))

2.33.1

Not secure
[2.33.1](https://github.com/virtool/virtool-core/compare/2.33.0...2.33.1) (2022-09-23)


Bug Fixes

* make index file size optional ([6d9a49a](https://github.com/virtool/virtool-core/commit/6d9a49a613baf8ea083f51cf8d043fc2b0e1b1d8))

2.33.0

Not secure
[2.33.0](https://github.com/virtool/virtool-core/compare/2.32.1...2.33.0) (2022-09-23)


Features

* add upload search result model ([e91bcc1](https://github.com/virtool/virtool-core/commit/e91bcc19f2ab805d7a80e7d0e317bbdfb30329d7))

2.32.1

Not secure
[2.32.1](https://github.com/virtool/virtool-core/compare/2.32.0...2.32.1) (2022-09-21)


Bug Fixes

* update reference and index models ([b2eb083](https://github.com/virtool/virtool-core/commit/b2eb083422501196f2653984645f5e7f3341db9b))

2.32.0

Not secure
[2.32.0](https://github.com/virtool/virtool-core/compare/2.31.1...2.32.0) (2022-09-20)


Features

* update reference and task models ([46c7d6a](https://github.com/virtool/virtool-core/commit/46c7d6aaee0e985b57327038dcc7dacf286d49bf))

2.31.1

Not secure
[2.31.1](https://github.com/virtool/virtool-core/compare/2.31.0...2.31.1) (2022-09-15)


Bug Fixes

* use nested models for IndexMinimal ([01a8afe](https://github.com/virtool/virtool-core/commit/01a8afe43dc6c4f7138f19fd0ea6e990ef85e48c))

2.31.0

Not secure
[2.31.0](https://github.com/virtool/virtool-core/compare/2.30.0...2.31.0) (2022-09-14)


Features

* add validator to prevent null values for some optional fields ([9e03465](https://github.com/virtool/virtool-core/commit/9e03465b787e2734ea491ee0058830e3d9199a75))

2.30.0

Not secure
[2.30.0](https://github.com/virtool/virtool-core/compare/2.29.0...2.30.0) (2022-09-13)


Features

* add index search result model ([f514ff6](https://github.com/virtool/virtool-core/commit/f514ff69e0e80a6c27c4ab6f0b5134c3a15a2d71))

2.29.0

Not secure
[2.29.0](https://github.com/virtool/virtool-core/compare/2.28.0...2.29.0) (2022-09-09)


Features

* add reference search model ([2381b61](https://github.com/virtool/virtool-core/commit/2381b61040a91963e19a8b5a83278a93a5e95707))

2.28.0

Not secure
[2.28.0](https://github.com/virtool/virtool-core/compare/2.27.7...2.28.0) (2022-09-09)


Features

* add otu search result model ([aca4dc6](https://github.com/virtool/virtool-core/commit/aca4dc6f564173916ddff4525ac2c841ea196ea2))

2.27.7

Not secure
[2.27.7](https://github.com/virtool/virtool-core/compare/2.27.6...2.27.7) (2022-09-09)


Bug Fixes

* use nested users in most places ([6715398](https://github.com/virtool/virtool-core/commit/6715398f7bafafe575666ca7e19fc81fd017de0a))

2.27.6

Not secure
[2.27.6](https://github.com/virtool/virtool-core/compare/2.27.5...2.27.6) (2022-09-08)


Bug Fixes

* remove user, created_at, imported fields of otus ([e54b456](https://github.com/virtool/virtool-core/commit/e54b45671a66bc6601f865bd846489fd9b1e5919))

2.27.5

Not secure
[2.27.5](https://github.com/virtool/virtool-core/compare/2.27.4...2.27.5) (2022-09-08)


Bug Fixes

* use nested history in otu model ([723d39f](https://github.com/virtool/virtool-core/commit/723d39f3af4e592df8701a8aedc547c0e34a3f33))


Reverts

* fix bad commit message ([9eb4efe](https://github.com/virtool/virtool-core/commit/9eb4efed4c5e3934bef8fe2b0389fdbcb34e0734))

2.27.4

Not secure
[2.27.4](https://github.com/virtool/virtool-core/compare/2.27.3...2.27.4) (2022-09-08)


Bug Fixes

* correct otu models ([23d02d5](https://github.com/virtool/virtool-core/commit/23d02d53c404a80bb0614e0ae8cfeab201f2ddfd))

2.27.3

Not secure
[2.27.3](https://github.com/virtool/virtool-core/compare/2.27.2...2.27.3) (2022-09-08)


Bug Fixes

* use nested reference in otu model ([e1d0bbc](https://github.com/virtool/virtool-core/commit/e1d0bbca5cfb3ce97bbc8b42e47079cc6d906975))

2.27.2

Not secure
[2.27.2](https://github.com/virtool/virtool-core/compare/2.27.1...2.27.2) (2022-09-07)


Bug Fixes

* make certain upload fields optional ([3aa5e42](https://github.com/virtool/virtool-core/commit/3aa5e4203cc0add402a779d37fab1c4c8632fb40))

2.27.1

Not secure
[2.27.1](https://github.com/virtool/virtool-core/compare/2.27.0...2.27.1) (2022-09-07)


Bug Fixes

* accept optional enum for segment molecule ([f93b204](https://github.com/virtool/virtool-core/commit/f93b204648c206d1a266e701f30d18aa3d1f7ba5))

2.27.0

Not secure
[2.27.0](https://github.com/virtool/virtool-core/compare/2.26.3...2.27.0) (2022-09-06)


Features

* add API key model ([3870a06](https://github.com/virtool/virtool-core/commit/3870a061f18debbf4dd8316a9c4fdefe1a41ef16))

2.26.3

Not secure
[2.26.3](https://github.com/virtool/virtool-core/compare/2.26.2...2.26.3) (2022-09-01)


Bug Fixes

* make subtraction user field optional ([93dcd9c](https://github.com/virtool/virtool-core/commit/93dcd9c7a1309f4d755abc6a6380511181e58740))

2.26.2

Not secure
[2.26.2](https://github.com/virtool/virtool-core/compare/2.26.1...2.26.2) (2022-09-01)


Bug Fixes

* make substraction count optional ([ff9f799](https://github.com/virtool/virtool-core/commit/ff9f799e9de3120582df1a0070400ca9980996b7))

2.26.1

Not secure
[2.26.1](https://github.com/virtool/virtool-core/compare/2.26.0...2.26.1) (2022-09-01)


Bug Fixes

* update subtraction model ([b0d17cf](https://github.com/virtool/virtool-core/commit/b0d17cf9a4fbe3d1e92d39d592b37a0cdb4b9abe))

2.26.0

Not secure
[2.26.0](https://github.com/virtool/virtool-core/compare/2.25.8...2.26.0) (2022-09-01)


Features

* add model for upload search result ([ab93966](https://github.com/virtool/virtool-core/commit/ab93966068bec79fcde913942b93319bb18bb03b))

2.25.8

Not secure
[2.25.8](https://github.com/virtool/virtool-core/compare/2.25.7...2.25.8) (2022-08-31)


Bug Fixes

* don't use default value for account email ([d616db1](https://github.com/virtool/virtool-core/commit/d616db1f3534f8c882bc46c9de236c0da2a97844))

2.25.7

Not secure
[2.25.7](https://github.com/virtool/virtool-core/compare/2.25.6...2.25.7) (2022-08-31)


Bug Fixes

* make some hmm status fields optional ([7f7f53b](https://github.com/virtool/virtool-core/commit/7f7f53b0775242ffd863fb337a5967f56a68fda6))

2.25.6

Not secure
[2.25.6](https://github.com/virtool/virtool-core/compare/2.25.5...2.25.6) (2022-08-30)


Bug Fixes

* remove hmm hidden field ([590d056](https://github.com/virtool/virtool-core/commit/590d056fb8f506e7c4f83ee34885f2295df5f2b7))

2.25.5

Not secure
[2.25.5](https://github.com/virtool/virtool-core/compare/2.25.4...2.25.5) (2022-08-29)


Bug Fixes

* add hmm status model ([b30b418](https://github.com/virtool/virtool-core/commit/b30b418f75fa3b78027dc2679b86ccbc09eb5177))

2.25.4

Not secure
[2.25.4](https://github.com/virtool/virtool-core/compare/2.25.3...2.25.4) (2022-08-29)


Bug Fixes

* allow strings for workflow tag fields ([5e584eb](https://github.com/virtool/virtool-core/commit/5e584ebaec9ffc1488dd4c062d58b69c6be73733))
* change hmm name field to names ([cf23d1e](https://github.com/virtool/virtool-core/commit/cf23d1ed1469c6b34e9b7ba29f00a8c7efc42747))

2.25.3

Not secure
[2.25.3](https://github.com/virtool/virtool-core/compare/2.25.2...2.25.3) (2022-08-29)


Bug Fixes

* prevent forward ref error and add tests for sample ([179ec43](https://github.com/virtool/virtool-core/commit/179ec43cd055c37fa687f86bb23497b0b2e3cf03))

2.25.2

Not secure
[2.25.2](https://github.com/virtool/virtool-core/compare/2.25.1...2.25.2) (2022-08-26)


Bug Fixes

* allow strings for sample workflow tag fields ([1c8058d](https://github.com/virtool/virtool-core/commit/1c8058d2f5582e0d1a1d022024fa8898ca3622a0))

2.25.1

Not secure
[2.25.1](https://github.com/virtool/virtool-core/compare/2.25.0...2.25.1) (2022-08-26)


Bug Fixes

* use nested user in sample model ([3d501eb](https://github.com/virtool/virtool-core/commit/3d501eb84958957ab69e8c501a2d87de9ba21652))

2.25.0

Not secure
[2.25.0](https://github.com/virtool/virtool-core/compare/2.24.0...2.25.0) (2022-08-24)


Features

* add acquired job model and counts field to search result ([50e2036](https://github.com/virtool/virtool-core/commit/50e20368afe73574ef80c8b4ed4e9f7cf341db9b))

2.24.0

Not secure
[2.24.0](https://github.com/virtool/virtool-core/compare/2.23.4...2.24.0) (2022-08-24)


Features

* add job search result model ([aff1a8b](https://github.com/virtool/virtool-core/commit/aff1a8b015a105bc7cc2753f9c4cd30029f79539))

2.23.4

Not secure
[2.23.4](https://github.com/virtool/virtool-core/compare/2.23.3...2.23.4) (2022-08-24)


Bug Fixes

* make job stage nullable ([7e9af4d](https://github.com/virtool/virtool-core/commit/7e9af4d6e60e2b14ec8bf2c33a5733ad3f7679eb))

2.23.3

Not secure
[2.23.3](https://github.com/virtool/virtool-core/compare/2.23.2...2.23.3) (2022-08-24)


Bug Fixes

* make job model more accurate ([89e01f6](https://github.com/virtool/virtool-core/commit/89e01f64f2bf77a9d5bdd52d64e1943b0381b1a9))

2.23.2

Not secure
[2.23.2](https://github.com/virtool/virtool-core/compare/2.23.1...2.23.2) (2022-08-18)


Bug Fixes

* make analysis file size field optional ([dd27547](https://github.com/virtool/virtool-core/commit/dd2754731fa7f70bffc2d63515becf7ea30c0dfd))

2.23.1

Not secure
[2.23.1](https://github.com/virtool/virtool-core/compare/2.23.0...2.23.1) (2022-08-17)


Bug Fixes

* make analysis file model uploaded_at optional ([2dd0cad](https://github.com/virtool/virtool-core/commit/2dd0cadafa1860fc470fe0e7033e5afdb44a772c))

2.23.0

Not secure
[2.23.0](https://github.com/virtool/virtool-core/compare/2.22.3...2.23.0) (2022-08-17)


Features

* default updated_at to created_at in analysis model ([ec25310](https://github.com/virtool/virtool-core/commit/ec25310a82c106528c52eaf2179af51ef5404aac))

2.22.3

Not secure
[2.22.3](https://github.com/virtool/virtool-core/compare/2.22.2...2.22.3) (2022-08-17)


Bug Fixes

* use correct type for sample read upload ([6dc5ce6](https://github.com/virtool/virtool-core/commit/6dc5ce62c8fecd35cfca8698306f33d250095bbb))

2.22.2

Not secure
[2.22.2](https://github.com/virtool/virtool-core/compare/2.22.1...2.22.2) (2022-08-17)


Bug Fixes

* make sample quality nullable ([ae83328](https://github.com/virtool/virtool-core/commit/ae8332881aa57e16704bb6b089a4d4a0f1a2425e))

2.22.1

Not secure
[2.22.1](https://github.com/virtool/virtool-core/compare/2.22.0...2.22.1) (2022-08-16)


Bug Fixes

* use nested subtraction in analyses model ([b574414](https://github.com/virtool/virtool-core/commit/b574414e2ef40c180f83981fab873c60f58564a2))

2.22.0

Not secure
[2.22.0](https://github.com/virtool/virtool-core/compare/2.21.0...2.22.0) (2022-08-16)


Bug Fixes

* remove subtractions field from SampleMinimal ([a9f9bc5](https://github.com/virtool/virtool-core/commit/a9f9bc5e00bf7435bfab0b7261c08103dca81b1a))


Features

* add nested models for analysis minimal ([ee2c640](https://github.com/virtool/virtool-core/commit/ee2c640d3610a8446bbda27b4af7529dad381c0f))

2.21.0

Not secure
[2.21.0](https://github.com/virtool/virtool-core/compare/2.20.0...2.21.0) (2022-08-15)


Features

* convert _id to id in models ([312d19d](https://github.com/virtool/virtool-core/commit/312d19d29acd419c22c8b8a1ca12927eb01c61bc))

2.20.0

Not secure
[2.20.0](https://github.com/virtool/virtool-core/compare/2.19.0...2.20.0) (2022-08-12)


Features

* add sample search result model ([61bed5d](https://github.com/virtool/virtool-core/commit/61bed5dc8cf48fe6b7658c4a07bd893a90804e17))

2.19.0

Not secure
[2.19.0](https://github.com/virtool/virtool-core/compare/2.18.1...2.19.0) (2022-08-10)


Features

* make account model email field optional ([e490744](https://github.com/virtool/virtool-core/commit/e490744577371a496625f5d5737bc7c325d312e7))

2.18.1

Not secure
[2.18.1](https://github.com/virtool/virtool-core/compare/2.18.0...2.18.1) (2022-08-10)


Bug Fixes

* accept any type for history diff field ([3bd4cbc](https://github.com/virtool/virtool-core/commit/3bd4cbc338cfc1776ceaa9543a2ba7c4d1922379))

2.18.0

Not secure
[2.18.0](https://github.com/virtool/virtool-core/compare/2.17.0...2.18.0) (2022-08-05)


Features

* update group and user models ([9db5c08](https://github.com/virtool/virtool-core/commit/9db5c0857108639a30cf5c81155500c0504feebc))

2.16.0

Not secure
[2.16.0](https://github.com/virtool/virtool-core/compare/2.15.0...2.16.0) (2022-08-02)


Features

* add email and validation to account model ([d6c57b9](https://github.com/virtool/virtool-core/commit/d6c57b9f626a2a5d902b469697c4d65620112615))

2.15.0

Not secure
[2.15.0](https://github.com/virtool/virtool-core/compare/2.14.0...2.15.0) (2022-07-27)


Features

* add users to group model ([8417ce6](https://github.com/virtool/virtool-core/commit/8417ce613a422b91cd3abedb6431f8936f24ac98))

2.14.0

Not secure
[2.14.0](https://github.com/virtool/virtool-core/compare/2.13.0...2.14.0) (2022-07-27)


Features

* add ReferencePermission enum ([115a270](https://github.com/virtool/virtool-core/commit/115a270ec22f87268ca27514a5a437cb23cc498d))

2.13.0

Not secure
[2.13.0](https://github.com/virtool/virtool-core/compare/2.12.0...2.13.0) (2022-07-19)


Features

* add name to group model ([0b628dc](https://github.com/virtool/virtool-core/commit/0b628dc77fe0b13fb51e991e96fba0feaea21f6a))

2.12.0

Not secure
[2.12.0](https://github.com/virtool/virtool-core/compare/2.11.0...2.12.0) (2022-07-15)


Features

* add data models for samples ([6bfe45a](https://github.com/virtool/virtool-core/commit/6bfe45a643ff5fa7cc2d3e7b90d4d04653f958bc))

2.11.0

Not secure
[2.11.0](https://github.com/virtool/virtool-core/compare/2.10.1...2.11.0) (2022-07-14)


Features

* add settings data model ([d66de3c](https://github.com/virtool/virtool-core/commit/d66de3c2d2f8520be4364f38ed39d967f2543c25))

2.10.1

Not secure
[2.10.1](https://github.com/virtool/virtool-core/compare/2.10.0...2.10.1) (2022-07-11)


Bug Fixes

* add enum for quick_analyze_workflow ([68c680c](https://github.com/virtool/virtool-core/commit/68c680c4c93af3f8afc70a67d2cca445c2ef8203))

2.10.0

Not secure
[2.10.0](https://github.com/virtool/virtool-core/compare/2.9.2...2.10.0) (2022-07-07)


Features

* add data models for analysis ([6e84a54](https://github.com/virtool/virtool-core/commit/6e84a5405fd0840650f079cac735dfb123d7ee42))

2.9.2

Not secure
[2.9.2](https://github.com/virtool/virtool-core/compare/2.9.1...2.9.2) (2022-07-06)


Bug Fixes

* add ReferenceNested model ([569abc1](https://github.com/virtool/virtool-core/commit/569abc14d3fe2e147cc2c1bec7995614389e3a3c))

2.9.1

Not secure
[2.9.1](https://github.com/virtool/virtool-core/compare/2.9.0...2.9.1) (2022-07-06)


Bug Fixes

* make enum classes serializable ([57a9f5e](https://github.com/virtool/virtool-core/commit/57a9f5ea43b223ccbd17ebbc7abc08a407262d24))

2.9.0

Not secure
[2.9.0](https://github.com/virtool/virtool-core/compare/2.8.1...2.9.0) (2022-07-05)


Features

* add data models for account ([c25bf7d](https://github.com/virtool/virtool-core/commit/c25bf7d226d1c1961be962d35788baa3b2deb17e))

2.8.1

Not secure
[2.8.1](https://github.com/virtool/virtool-core/compare/2.8.0...2.8.1) (2022-06-22)


Bug Fixes

* add b2c support to user models ([65ac3f3](https://github.com/virtool/virtool-core/commit/65ac3f3d103cb8015da401723c160261811c0873))

2.8.0

Not secure
[2.8.0](https://github.com/virtool/virtool-core/compare/2.7.0...2.8.0) (2022-06-22)


Features

* add index data models ([f40ed4e](https://github.com/virtool/virtool-core/commit/f40ed4e81a74b3afc104ed06e99e376254ed692e))

2.7.0

Not secure
[2.7.0](https://github.com/virtool/virtool-core/compare/2.6.0...2.7.0) (2022-06-22)


Features

* add otu data models ([fabac29](https://github.com/virtool/virtool-core/commit/fabac29c6e458ecbc88287f8a0b1976a71e3ecd4))

2.6.0

Not secure
[2.6.0](https://github.com/virtool/virtool-core/compare/2.5.0...2.6.0) (2022-06-22)


Features

* search result models ([d29e595](https://github.com/virtool/virtool-core/commit/d29e595750fac2b490dce3a946c73fd742d53b6b))

2.5.0

Not secure
[2.5.0](https://github.com/virtool/virtool-core/compare/2.4.0...2.5.0) (2022-06-20)


Features

* add search result model ([d22c023](https://github.com/virtool/virtool-core/commit/d22c023d99e8b0a2041c10c9d7a173a294270179))

2.4.0

Not secure
[2.4.0](https://github.com/virtool/virtool-core/compare/2.3.0...2.4.0) (2022-06-20)


Features

* add job models ([9af01ca](https://github.com/virtool/virtool-core/commit/9af01ca24dba92678eb3c7a3e8d4f64638e2c7c4))

2.3.0

Not secure
[2.3.0](https://github.com/virtool/virtool-core/compare/2.2.2...2.3.0) (2022-06-17)


Features

* add history data models ([211949c](https://github.com/virtool/virtool-core/commit/211949cf2c2088ca9ee0e6399b1d24481a91c2d2))

2.2.2

Not secure
[2.2.2](https://github.com/virtool/virtool-core/compare/2.2.1...2.2.2) (2022-06-16)


Bug Fixes

* make the user.primary_group field optional ([04f853e](https://github.com/virtool/virtool-core/commit/04f853e9febdb810c8dd552839bfc1ee7a2854ab))

2.2.1

Not secure
[2.2.1](https://github.com/virtool/virtool-core/compare/2.2.0...2.2.1) (2022-06-16)


Bug Fixes

* update subtraction models ([16bae79](https://github.com/virtool/virtool-core/commit/16bae7956cb5190dcac37effb08e67ccef9c3a1d))

2.2.0

Not secure
[2.2.0](https://github.com/virtool/virtool-core/compare/2.1.0...2.2.0) (2022-06-15)


Bug Fixes

* correct the type of created_at field ([2469179](https://github.com/virtool/virtool-core/commit/24691793533017d3aa22ce902fc045ee9db79b10))
* correctly import from users ([a7ecf98](https://github.com/virtool/virtool-core/commit/a7ecf984f43b64d54b27cc1a5cbb7c10817ba482))


Features

* add reference data models ([5afc3cf](https://github.com/virtool/virtool-core/commit/5afc3cfe67b4ddd51121327b84603e8ba4ed9119))

2.1.0

Not secure
[2.1.0](https://github.com/virtool/virtool-core/compare/2.0.1...2.1.0) (2022-06-15)


Features

* add permissions enum ([7d39673](https://github.com/virtool/virtool-core/commit/7d39673d54b17440e7e1e04ad1c3d55033bda717))

2.0.1

Not secure
[2.0.1](https://github.com/virtool/virtool-core/compare/2.0.0...2.0.1) (2022-06-15)


Bug Fixes

* add an id-only minimal group model ([6543cda](https://github.com/virtool/virtool-core/commit/6543cdabb35519e3a60c8b174125a110dee4f9c7))

2.0.0

Not secure
[2.0.0](https://github.com/virtool/virtool-core/compare/1.5.0...2.0.0) (2022-06-14)


Bug Fixes

* reduce minimal user model ([a5e00e3](https://github.com/virtool/virtool-core/commit/a5e00e3198e2138eaac075060187b15c8324a892))


BREAKING CHANGES

* This remove fields from the minimal user representation.

1.5.0

Not secure
[1.5.0](https://github.com/virtool/virtool-core/compare/1.4.0...1.5.0) (2022-06-14)


Features

* add provisional project models ([6ee5f0e](https://github.com/virtool/virtool-core/commit/6ee5f0e1ccca3762ce6dda54af7909bb46064f2f))

1.4.0

Not secure
[1.4.0](https://github.com/virtool/virtool-core/compare/1.3.0...1.4.0) (2022-06-14)


Features

* add task data models ([d17369b](https://github.com/virtool/virtool-core/commit/d17369bc333a7b0d8aead1fe5d5aa9c8bd614e7b))

1.3.0

Not secure
[1.3.0](https://github.com/virtool/virtool-core/compare/1.2.0...1.3.0) (2022-06-09)


Features

* add upload models ([92fe98e](https://github.com/virtool/virtool-core/commit/92fe98e75724a213903100aa451781697de7b7d7))

1.2.0

Not secure
[1.2.0](https://github.com/virtool/virtool-core/compare/1.1.0...1.2.0) (2022-06-09)


Features

* add label data model ([3cfa0d6](https://github.com/virtool/virtool-core/commit/3cfa0d6a7f3a03678e7ad19c353cb6dabe4a681c))

1.1.0

Not secure
[1.1.0](https://github.com/virtool/virtool-core/compare/1.0.0...1.1.0) (2022-06-09)


Features

* add buffered_bulk_writer from virtool ([ae3b2f2](https://github.com/virtool/virtool-core/commit/ae3b2f2f07227aa7f3d233ec89469e32c3cc0e96))

1.0.0

Not secure
[1.0.0](https://github.com/virtool/virtool-core/compare/0.9.0...1.0.0) (2022-06-08)


Features

* consolidate redis code into core ([123a87c](https://github.com/virtool/virtool-core/commit/123a87cb0f6fb0f7bf50b85a978ff5fe742a3503))


BREAKING CHANGES

* Changes API for Redis utilities.

0.9.0

Not secure
[0.9.0](https://github.com/virtool/virtool-core/compare/0.8.0...0.9.0) (2022-06-07)


Features

* create core HMM models ([dd3ec2c](https://github.com/virtool/virtool-core/commit/dd3ec2c1bb1d1a5441f6489915f4f0905a6f7a7a))

0.8.0

Not secure
[0.8.0](https://github.com/virtool/virtool-core/compare/0.7.0...0.8.0) (2022-06-07)


Features

* create core subtraction models ([1bc125d](https://github.com/virtool/virtool-core/commit/1bc125d5cde393b3268e01b2eaf58de6bc0b3107))

0.7.0

Not secure
[0.7.0](https://github.com/virtool/virtool-core/compare/0.6.0...0.7.0) (2022-06-03)


Features

* add full and minimal user models ([e6ef54b](https://github.com/virtool/virtool-core/commit/e6ef54b1a6ad4370713275082be8c3da68421395))

0.6.0

Not secure
[0.6.0](https://github.com/virtool/virtool-core/compare/0.5.0...0.6.0) (2022-05-30)


Features

* create core group model ([f993b85](https://github.com/virtool/virtool-core/commit/f993b85c86df5e7faf6b820a62e7989ec09e7927))

0.5.0

Not secure
[0.5.0](https://github.com/virtool/virtool-core/compare/0.4.0...0.5.0) (2022-05-13)


Features

* move logging configuration to core ([716d54b](https://github.com/virtool/virtool-core/commit/716d54b16f9915793b1cc8418b873e57e2661e5c))

0.4.0

Not secure
[0.4.0](https://github.com/virtool/virtool-core/compare/0.3.0...0.4.0) (2021-12-03)


Bug Fixes

* resolve aiohttp security issue ([df5e3cc](https://github.com/virtool/virtool-core/commit/df5e3cc45a591c755396952e2c60f7e38063d4f9))
* use correct release repositoryUrl ([c9cb001](https://github.com/virtool/virtool-core/commit/c9cb0015c563dabfb646c9f1f080d860b757ffb6))


Features

* add redis connection function ([0590f04](https://github.com/virtool/virtool-core/commit/0590f04618122c069b38a3285d6d972dbf257c89))

0.3.0

Not secure
Added
* Add data models from `virtool-workflow` to be reused in Virtool.

Changed
* Do not use Mongo in CI pipeline.

Removed
* Removed modules no shared between `virtool` and `virtool-workflow`: `db`, `history`, `caches`, `otus`, `samples`, `analysis`, `subtractions`.
* Removed unshared functions: `ensure_data_dir` and `random_alphanumeric`.
* Removed `motor` and `snapshottest` dependencies.

0.2.0

Not secure
Changed
- use `Path` objects instead of `str`

0.1.1

Not secure
Changed
- updated documentation

Fixed
- updated some dependencies to resolve `coroutine` deprecation warning in Python 3.9

0.1.0

Not secure
Initial release of `virtool-core`.