Transcriptic

------


Updated
~~~~~~~

- Setup now requires plotly 1.9.6 or greater

------


Fixed
~~~~~

- Better handling of Datasets with no ``well_map`` property in
kinetics.spectrophotometry

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Added
~~~~~

- New documentation for the new testing framework and how to write
tests
- Added Dockerfile for running Transcriptic containers. Compatible with
CI tools (e.g. Jenkins) as well
- New documentation added and hosted on
http://transcriptic.readthedocs.io/en/latest/


Updated
~~~~~~~

- Migrated the test framework from vanilla unittest2 to py.test
- Rewrote documentation structure and added misc. documentation related
changes
- ``api`` module has been removed and merged into ``config`` module.
The Connection object now handles all api calls.
- All references to ``ctx`` has been renamed to ``api``


Fixed
~~~~~

- Fixed bug in spectrophotometry handling attributes
- Fixed compatibility issue with running ``transcriptic preview`` on
python3

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Updated
~~~~~~~

- Transcriptic CLI subcommands: compile, init, preview, summarize no
longer require login


Fixed
~~~~~

- ``transcriptic runs`` command now works in CLI

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Added
~~~~~

- ``__version__`` variable for checking version. Enable version
checking in CLI using ``transcriptic --version``
- New Analysis module: Kinetics; ``Kinetics`` base object and
``Kinetics.Spectrophotometry`` for analyzing kinetics-based data such
as growth curves
- Expose additional properties of Dataset object: ``operation``,
``container``, ``data_type``

------


Updated
~~~~~~~

- Objects module has been heavily reworked and documentation added.
This is especially true for Project, Run and Dataset objects


Fixed
~~~~~

- Fixed package related CLI issues