Sequana-pipetools

Latest version: v1.0.1

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0.16.3

What's Changed
* Allow click to handle several arguments by cokelaer in https://github.com/sequana/sequana_pipetools/pull/93


**Full Changelog**: https://github.com/sequana/sequana_pipetools/compare/v0.16.2...v0.16.3

0.16.2

What's Changed
* Fixes --from-project with click, removes useless fctions, fix sequana version by cokelaer in https://github.com/sequana/sequana_pipetools/pull/92


**Full Changelog**: https://github.com/sequana/sequana_pipetools/compare/v0.16.1...v0.16.2

0.16.1

What's Changed
* Rename and fix error_report into onerror. by cokelaer in https://github.com/sequana/sequana_pipetools/pull/83


**Full Changelog**: https://github.com/sequana/sequana_pipetools/compare/v0.16.0...v0.16.1

0.16.0

What's Changed
* Implement click for all standalones and pipelines by cokelaer in https://github.com/sequana/sequana_pipetools/pull/78
* Major update related to click by cokelaer in https://github.com/sequana/sequana_pipetools/pull/82
*
* All Options classes have now an equivalent using click. We kept the argparse-related options for back-compatibility for now
* --run-mode removed and replaced by --profile options. Profiles are used and stored withub .sequana/profiles
* Remove --slurm-cores-per-job redundant with resources from snakemake
* cluster_config are now deprecated in favor of profile
* sequana_slurm_status removed. Use manager.error_report in pipelines instead

0.15.0

What's Changed
* replace requirements.txt by tools.txt by cokelaer in https://github.com/sequana/sequana_pipetools/pull/75
* add getmetadata
* remove useless code related to former rules

**Full Changelog**: https://github.com/sequana/sequana_pipetools/compare/v0.14.1...v0.15.0

0.14.1

What's Changed
* remove print statement by cokelaer in https://github.com/sequana/sequana_pipetools/pull/74

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