Renku

-------------------------------------------------------------------------------------------------------

Bug Fixes
~~~~~~~~~

- adds \_label and commit data to imported dataset files, single commit
for imports
(`651 <https://github.com/SwissDataScienceCenter/renku-python/issues/651>`__)
(`75ce369 <https://github.com/SwissDataScienceCenter/renku-python/commit/75ce369>`__)
- always add commit to dataset if possible
(`648 <https://github.com/SwissDataScienceCenter/renku-python/issues/648>`__)
(`7659bc8 <https://github.com/SwissDataScienceCenter/renku-python/commit/7659bc8>`__),
closes
`646 <https://github.com/SwissDataScienceCenter/renku-python/issues/646>`__
- cleanup needed for integration tests on py35
(`653 <https://github.com/SwissDataScienceCenter/renku-python/issues/653>`__)
(`fdd7215 <https://github.com/SwissDataScienceCenter/renku-python/commit/fdd7215>`__)
- fixed serialization of datetime to ISO format
(`629 <https://github.com/SwissDataScienceCenter/renku-python/issues/629>`__)
(`693d59d <https://github.com/SwissDataScienceCenter/renku-python/commit/693d59d>`__)
- fixes broken integration test
(`649 <https://github.com/SwissDataScienceCenter/renku-python/issues/649>`__)
(`04eba66 <https://github.com/SwissDataScienceCenter/renku-python/commit/04eba66>`__)
- hide ``image``, ``pull``, ``runner``, ``show``, ``workon`` and ``deactivate`` commands
(`672 <https://github.com/SwissDataScienceCenter/renku-python/issues/672>`__)
(`a3e9998 <https://github.com/SwissDataScienceCenter/renku-python/commit/a3e9998>`__)
- integration tests fixed
(`685 <https://github.com/SwissDataScienceCenter/renku-python/issues/685>`__)
(`f0ea8f0 <https://github.com/SwissDataScienceCenter/renku-python/commit/f0ea8f0>`__)
- migration of old datasets
(`639 <https://github.com/SwissDataScienceCenter/renku-python/issues/639>`__)
(`4d4d7d2 <https://github.com/SwissDataScienceCenter/renku-python/commit/4d4d7d2>`__)
- migration time zones
(`683 <https://github.com/SwissDataScienceCenter/renku-python/issues/683>`__)
(`58c2de4 <https://github.com/SwissDataScienceCenter/renku-python/commit/58c2de4>`__)
- Removes unnecessary call to git lfs with no paths
(`658 <https://github.com/SwissDataScienceCenter/renku-python/issues/658>`__)
(`e32d48b <https://github.com/SwissDataScienceCenter/renku-python/commit/e32d48b>`__)
- renku home directory overwrite in tests
(`657 <https://github.com/SwissDataScienceCenter/renku-python/issues/657>`__)
(`90e1c48 <https://github.com/SwissDataScienceCenter/renku-python/commit/90e1c48>`__)
- upload metadata before actual files
(`652 <https://github.com/SwissDataScienceCenter/renku-python/issues/652>`__)
(`95ed468 <https://github.com/SwissDataScienceCenter/renku-python/commit/95ed468>`__)
- use ``latest_html`` for version check
(`647 <https://github.com/SwissDataScienceCenter/renku-python/issues/647>`__)
(`c6b0309 <https://github.com/SwissDataScienceCenter/renku-python/commit/c6b0309>`__),
closes
`641 <https://github.com/SwissDataScienceCenter/renku-python/issues/641>`__
- user-related metadata
(`655 <https://github.com/SwissDataScienceCenter/renku-python/issues/655>`__)
(`44183e6 <https://github.com/SwissDataScienceCenter/renku-python/commit/44183e6>`__)
- Zenodo export failing with relative paths
(`d40967c <https://github.com/SwissDataScienceCenter/renku-python/commit/d40967c>`__)

Features
~~~~~~~~

- dataverse import
(`626 <https://github.com/SwissDataScienceCenter/renku-python/issues/626>`__)
(`9f0f9a1 <https://github.com/SwissDataScienceCenter/renku-python/commit/9f0f9a1>`__)
- enable all datasets command to operate on dirty repository
(`607 <https://github.com/SwissDataScienceCenter/renku-python/issues/607>`__)
(`74e328b <https://github.com/SwissDataScienceCenter/renku-python/commit/74e328b>`__)
- explicit input output specification
(`598 <https://github.com/SwissDataScienceCenter/renku-python/issues/598>`__)
(`ce8ba67 <https://github.com/SwissDataScienceCenter/renku-python/commit/ce8ba67>`__)
- export filename as schema:name
(`643 <https://github.com/SwissDataScienceCenter/renku-python/issues/643>`__)
(`aed54bf <https://github.com/SwissDataScienceCenter/renku-python/commit/aed54bf>`__),
closes
`640 <https://github.com/SwissDataScienceCenter/renku-python/issues/640>`__
- support for indirect inputs and outputs
(`650 <https://github.com/SwissDataScienceCenter/renku-python/issues/650>`__)
(`e960a98 <https://github.com/SwissDataScienceCenter/renku-python/commit/e960a98>`__)

-------------------------------------------------------------------------------------------------------

Bug Fixes
~~~~~~~~~

- safe_path check always operates on str
(`603 <https://github.com/SwissDataScienceCenter/renku-python/issues/603>`__)
(`7c1c34e <https://github.com/SwissDataScienceCenter/renku-python/commit/7c1c34e>`__)

Features
~~~~~~~~

- add SoftwareAgent to Activity
(`590 <https://github.com/SwissDataScienceCenter/renku-python/issues/590>`__)
(`a60c20c <https://github.com/SwissDataScienceCenter/renku-python/commit/a60c20c>`__),
closes
`508 <https://github.com/SwissDataScienceCenter/renku-python/issues/508>`__

-------------------------------------------------------------------------------------------------------

Bug Fixes
~~~~~~~~~

- ensure external storage is handled correctly
(`592 <https://github.com/SwissDataScienceCenter/renku-python/issues/592>`__)
(`7938ac4 <https://github.com/SwissDataScienceCenter/renku-python/commit/7938ac4>`__)
- only check local repo for lfs filter
(`575 <https://github.com/SwissDataScienceCenter/renku-python/issues/575>`__)
(`a64dc79 <https://github.com/SwissDataScienceCenter/renku-python/commit/a64dc79>`__)
- **cli:** allow renku run with many inputs
(`f60783e <https://github.com/SwissDataScienceCenter/renku-python/commit/f60783e>`__),
closes
`552 <https://github.com/SwissDataScienceCenter/renku-python/issues/552>`__
- added check for overwriting datasets
(`541 <https://github.com/SwissDataScienceCenter/renku-python/issues/541>`__)
(`8c697fb <https://github.com/SwissDataScienceCenter/renku-python/commit/8c697fb>`__)
- escape whitespace in notebook name
(`584 <https://github.com/SwissDataScienceCenter/renku-python/issues/584>`__)
(`0542fcc <https://github.com/SwissDataScienceCenter/renku-python/commit/0542fcc>`__)
- modify json-ld for datasets
(`534 <https://github.com/SwissDataScienceCenter/renku-python/issues/534>`__)
(`ab6a719 <https://github.com/SwissDataScienceCenter/renku-python/commit/ab6a719>`__),
closes
`525 <https://github.com/SwissDataScienceCenter/renku-python/issues/525>`__
`526 <https://github.com/SwissDataScienceCenter/renku-python/issues/526>`__
- refactored tests and docs to align with updated ``pydocstyle``
(`586 <https://github.com/SwissDataScienceCenter/renku-python/issues/586>`__)
(`6f981c8 <https://github.com/SwissDataScienceCenter/renku-python/commit/6f981c8>`__)
- **cli:** add check of missing references
(`9a373da <https://github.com/SwissDataScienceCenter/renku-python/commit/9a373da>`__)
- **cli:** fail when removing non existing dataset
(`dd728db <https://github.com/SwissDataScienceCenter/renku-python/commit/dd728db>`__)
- **status:** fix renku status output when not in root folder
(`564 <https://github.com/SwissDataScienceCenter/renku-python/issues/564>`__)
(`873270d <https://github.com/SwissDataScienceCenter/renku-python/commit/873270d>`__),
closes
`551 <https://github.com/SwissDataScienceCenter/renku-python/issues/551>`__
- added dependencies for SSL support
(`565 <https://github.com/SwissDataScienceCenter/renku-python/issues/565>`__)
(`4fa0fed <https://github.com/SwissDataScienceCenter/renku-python/commit/4fa0fed>`__)
- **datasets:** strip query string from data filenames
(`450898b <https://github.com/SwissDataScienceCenter/renku-python/commit/450898b>`__)
- fixed serialization of creators
(`550 <https://github.com/SwissDataScienceCenter/renku-python/issues/550>`__)
(`6a9173c <https://github.com/SwissDataScienceCenter/renku-python/commit/6a9173c>`__)
- updated docs
(`539 <https://github.com/SwissDataScienceCenter/renku-python/issues/539>`__)
(`ff9a67c <https://github.com/SwissDataScienceCenter/renku-python/commit/ff9a67c>`__)
- **cli:** remove dataset aliases
(`6206e62 <https://github.com/SwissDataScienceCenter/renku-python/commit/6206e62>`__)
- **cwl:** detect script as input parameter
(`e23b75a <https://github.com/SwissDataScienceCenter/renku-python/commit/e23b75a>`__),
closes
`495 <https://github.com/SwissDataScienceCenter/renku-python/issues/495>`__
- **deps:** updated dependencies
(`691644d <https://github.com/SwissDataScienceCenter/renku-python/commit/691644d>`__)


Features
~~~~~~~~

- add dataset metadata to the KG
(`558 <https://github.com/SwissDataScienceCenter/renku-python/issues/558>`__)
(`fb443d7 <https://github.com/SwissDataScienceCenter/renku-python/commit/fb443d7>`__)
- **datasets:** export dataset to Zenodo
(`529 <https://github.com/SwissDataScienceCenter/renku-python/issues/529>`__)
(`fc6fd4f <https://github.com/SwissDataScienceCenter/renku-python/commit/fc6fd4f>`__)
- added support for working on dirty repo
(`ae67be7 <https://github.com/SwissDataScienceCenter/renku-python/commit/ae67be7>`__)
- **datasets:** edit dataset metadata
(`549 <https://github.com/SwissDataScienceCenter/renku-python/issues/549>`__)
(`db39083 <https://github.com/SwissDataScienceCenter/renku-python/commit/db39083>`__)
- integrate metadata from Zenodo
(`545 <https://github.com/SwissDataScienceCenter/renku-python/issues/545>`__)
(`4273d2a <https://github.com/SwissDataScienceCenter/renku-python/commit/4273d2a>`__)
- **config:** added global config manager
(`533 <https://github.com/SwissDataScienceCenter/renku-python/issues/533>`__)
(`938f820 <https://github.com/SwissDataScienceCenter/renku-python/commit/938f820>`__)
- **datasets:** import data from Zenodo
(`509 <https://github.com/SwissDataScienceCenter/renku-python/issues/509>`__)
(`52b2769 <https://github.com/SwissDataScienceCenter/renku-python/commit/52b2769>`__)

-------------------------------------------------------------------------------------------------------


Bug Fixes
~~~~~~~~~

- **api:** make methods lock free
(`1f63964 <https://github.com/SwissDataScienceCenter/renku-python/commit/1f63964>`__),
closes
`486 <https://github.com/SwissDataScienceCenter/renku-python/issues/486>`__
- use safe_load for parsing yaml
(`5383d1e <https://github.com/SwissDataScienceCenter/renku-python/commit/5383d1e>`__),
closes
`464 <https://github.com/SwissDataScienceCenter/renku-python/issues/464>`__
- **datasets:** link flag on dataset add
(`eae30f4 <https://github.com/SwissDataScienceCenter/renku-python/commit/eae30f4>`__)


Features
~~~~~~~~

- **api:** list datasets from a commit
(`04a9fe9 <https://github.com/SwissDataScienceCenter/renku-python/commit/04a9fe9>`__)
- **cli:** add dataset rm command
(`a70c7ce <https://github.com/SwissDataScienceCenter/renku-python/commit/a70c7ce>`__)
- **cli:** add rm command
(`cf0f502 <https://github.com/SwissDataScienceCenter/renku-python/commit/cf0f502>`__)
- **cli:** configurable format of dataset output
(`d37abf3 <https://github.com/SwissDataScienceCenter/renku-python/commit/d37abf3>`__)
- **dataset:** add existing file from current repo
(`575686b <https://github.com/SwissDataScienceCenter/renku-python/commit/575686b>`__),
closes
`99 <https://github.com/SwissDataScienceCenter/renku-python/issues/99>`__
- **datasets:** added ls-files command
(`ccc4f59 <https://github.com/SwissDataScienceCenter/renku-python/commit/ccc4f59>`__)
- **models:** reference context for relative paths
(`5d1e8e7 <https://github.com/SwissDataScienceCenter/renku-python/commit/5d1e8e7>`__),
closes
`452 <https://github.com/SwissDataScienceCenter/renku-python/issues/452>`__
- add JSON-LD output format for datasets
(`c755d7b <https://github.com/SwissDataScienceCenter/renku-python/commit/c755d7b>`__),
closes
`426 <https://github.com/SwissDataScienceCenter/renku-python/issues/426>`__
- generate ``Makefile`` with ``log –format Makefile``
(`1e440ce <https://github.com/SwissDataScienceCenter/renku-python/commit/1e440ce>`__)

-----

**Released 2019-10-30**

This is a bugfix release that fixes a SPARQL query in the graph service which
was causing Jena to stall and run out of memory (See
`159 <https://github.com/SwissDataScienceCenter/renku-graph/issues/159>`_ and
`163 <https://github.com/SwissDataScienceCenter/renku-graph/issues/163>`_).

-----

**Released 2019-08-28**

This is a relatively minor update.

Notable improvements
~~~~~~~~~~~~~~~~~~~~

⭐️ on launching an interactive environment, the user is shown the status of the
image build - no more guessing whether the Docker image is there!

⭐️ the source of project templates is now configurable so a platform admin can
provide custom templates if needed

⭐️ data and code nodes are styled differently in the graph view

⭐️ the base user images have been updated, notably the R image is now based on
Rocker instead of conda

For individual component changes:

* renku-notebooks `version 0.5.1