- Added root_tree (alias: root; rt) function to root a phylogenetic tree
1.4.0
- PhyKIT is now Python version 3.9 and BioPython 1.79 compatible
1.3.0
- Added function that estimates the evolutionary rate of a gene using tree-based properties. Function name is 'evolutionary_rate' or 'evo_rate'
1.2.2
- Added function to get the subtree of the last common ancestor among a set of taxa
1.2.0
- Added command line interfaces for all functions so that each command can more easily be executed. For example, 'phykit aln_len -h' can now be called using 'pk_aln_len -h'
1.1.2
- Added faidx (alias: get_entry; ge) function to extract fasta entries from a multi-fasta file