Parmed

Latest version: v4.2.2

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3.4.4

Bugs fixed
* reading gromacs topologies with insertion codes fixed by Valdes-Tresanco-MS in https://github.com/ParmEd/ParmEd/pull/1220
* Do not force CMAPs to write a ChamberParm instance by swails in https://github.com/ParmEd/ParmEd/pull/1224
* Reading a Gromacs topology fails with insertion code or negative number by Valdes-Tresanco-MS in https://github.com/ParmEd/ParmEd/pull/1222
* New pb radii sets by Valdes-Tresanco-MS in https://github.com/ParmEd/ParmEd/pull/1227
* Fix AmberParm.from_structure with CMAPs v3.4 by swails in https://github.com/ParmEd/ParmEd/pull/1234
* Added 3D-RISM with sander to mdin by Valdes-Tresanco-MS in https://github.com/ParmEd/ParmEd/pull/1239
* write PDB conect records for S-S bridges and HETATM by Valdes-Tresanco-MS in https://github.com/ParmEd/ParmEd/pull/1240
* Fix bug for nbfix/chamber in ParmEd v3.4 by swails in https://github.com/ParmEd/ParmEd/pull/1282


**Full Changelog**: https://github.com/ParmEd/ParmEd/compare/3.4.3...3.4.4

3.4.3

Finish ParmEd fixes for OpenMM 7.6 compatibility

3.4.2

3.4.1

This point-release update adds support for 12-6-4 parameters for additional water models.

3.4.0

* 1082 - Add support for Drude particles in parameter file reading and writing
* 1132 - Fix file detection errors for large NetCDF files and fix issue where modified RNA residue names get modified when writing PDB files
* 1122 - Fix conversions to GROMACS files when NBFIX terms are present from either Amber or CHARMM

3.3.0

* 1079 - Fixes a rare divide-by-zero error sometimes seen with LMOD in Amber
* 1072 - Make lxml an optional dependency by falling back to built-in xml module
* 1035 - Fixes parsing PSF files that do not have an NNB section and some CHARMM -> GROMACS conversions
* 1060 - Fixes Cl GB radius to match tleap
* 1059 - Fixes PSF parsing when residue IDs are not strict integers
* 1055 - Make the default PDB chain ID "Z" instead of "*"
* 1054 - Fixes a `DeprecationWarning` when importing collection ABCs

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