Nbgrader

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0.5.0

nbgrader version 0.5.0 is another very large release with some very
exciting new features! The highlights include:

- The formgrader is now an extension to the notebook, rather than a
standalone service.
- The formgrader also includes functionality for running
`nbgrader assign`, `nbgrader release`, `nbgrader collect`, and
`nbgrader autograde` directly from the browser.
- A new command `nbgrader zip_collect`, which helps with collecting
assignment files downloaded from a LMS.
- Hidden test cases are now supported.
- A lot of functionality has moved into standalone objects that can be
called directly from Python, as well as a high-level Python API in
`nbgrader.apps.NbGraderAPI` (see
`/api/high_level_api`{.interpreted-text role="doc"}).
- A new **Validate** notebook extension, which allows students to
validate an assignment notebook from the notebook itself (this is
equivalent functionality to the \"Validate\" button in the
Assignment List extension, but without requiring students to be
using the Assignment List).
- A new command `nbgrader db upgrade`, which allows you to migrate
your nbgrader database to the latest version without having to
manually execute SQL commands.
- New cells when using the Create Assignment extension will
automatically given randomly generated ids, so you don\'t have to
set them yourself.
- You can assign extra credit when using the formgrader.

**Important**: Users updating from 0.4.x to 0.5.0 should be aware that
they will need to update their nbgrader database using
`nbgrader db upgrade` and will need to reinstall the nbgrader extensions
(see `/user_guide/installation`{.interpreted-text role="doc"}).
Additionally, the configuration necessary to use the formgrader with
JupyterHub has changed, though it is now much more straightforward (see
`/configuration/jupyterhub_config`{.interpreted-text role="doc"}).

The full list of merged PRs includes:

- PR \789: Fix more inaccurate nbextension test failures after reruns
- PR \788: Fix inaccurate nbextension test failures after reruns
- PR \787: Fix slow API calls
- PR \786: Update documentation for nbgrader as a webapp
- PR \784: Fix race condition in validate extension tests
- PR \782: Implement nbgrader as a webapp
- PR \781: Assign missing notebooks a score of zero and mark as not
needing grading
- PR \780: Create a new high-level python API for nbgrader
- PR \779: Update the year!
- PR \778: Create and set permissions for exchange directory when
using `nbgrader release`
- PR \774: Add missing config options
- PR \772: Standalone versions of nbgrader assign, autograde, and
feedback
- PR \771: Fix mathjax rendering
- PR \770: Better cleanup when nbconvert-based apps crash
- PR \769: Fix nbgrader validate globbing for real this time
- PR \768: Extra credit
- PR \766: Make sure validation works with notebook globs
- PR \764: Migrate database with alembic
- PR \762: More robust saving of the notebook in create assignment
tests
- PR \761: Validate assignment extension
- PR \759: Fix nbextension tests
- PR \758: Set random cell ids
- PR \756: Fix deprecations and small bugs
- PR \755: Fast validate
- PR \754: Set correct permissions when submitting assignments
- PR \752: Add some more informative error messages in zip collect
- PR \751: Don\'t create the gradebook database until formgrader is
accessed
- PR \750: Add documentation for how to pass numeric ids
- PR \747: Skip over students with empty submissions
- PR \746: Fix bug with \--to in custom exporters
- PR \738: Refactor the filtering of existing submission notebooks
for formgrader
- PR \735: Add DataTables functionality to existing formgrade tables
- PR \732: Fix the collecting of submission files for multiple
attempts of multiple notebook assignments
- PR \731: Reset late submission penalty before checking if
submission is late or not
- PR \717: Update docs regarding solution delimeters
- PR \714: Preserve kernelspec when autograding
- PR \713: Use new exchange functionality in assignment list app
- PR \712: Move exchange functionality into non-application classes
- PR \711: Move some config options into a CourseDirectory object.
- PR \709: Fix formgrader tests link for 0.4.x branch (docs)
- PR \707: Force rerun nbgrader commands
- PR \704: Fix nbextension tests
- PR \701: Set proxy-type=none in phantomjs
- PR \700: use check\_call for extension installation in tests
- PR \698: Force phantomjs service to terminate in Linux
- PR \696: Turn the gradebook into a context manager
- PR \695: Use sys.executable when executing nbgrader
- PR \693: Update changelog from 0.4.0 PR \681: Hide tests in \"Autograder tests\" cells
- PR \622: Integrate the formgrader into the notebook
- PR \526: Processing of LMS downloaded submission files

Thanks to the following contributors who submitted PRs or reported
issues that were merged/closed for the 0.5.0 release:

- AnotherCodeArtist
- dementrock
- dsblank
- ellisonbg
- embanner
- huwf
- jhamrick
- jilljenn
- lgpage
- minrk
- suchow
- Szepi
- whitead
- ZelphirKaltstahl
- zpincus

0.4.x

0.4.0

nbgrader version 0.4.0 is a substantial release with lots of changes and
several new features. The highlights include:

- Addition of a command to modify students and assignments in the
database (`nbgrader db`)
- Validation of nbgrader metadata, and a command to automatically
upgrade said metadata from the previous version (`nbgrader update`)
- Support for native Jupyter nbextension and serverextension
installation, and deprecation of the `nbgrader nbextension` command
- Buttons to reveal students\' names in the formgrader
- Better reporting of errors and invalid submissions in the
\"Assignment List\" extension
- Addition of a menu to change between different courses in the
\"Assignment List\" extension
- Support to run the formgrader as an official JupyterHub service
- More flexible code and text stubs when creating assignments
- More thorough documentations

**Important**: Users updating from 0.3.x to 0.4.0 should be aware that
they will need to update the metadata in their assignments using
`nbgrader update` and will need to reinstall the nbgrader extensions
(see `/user_guide/installation`{.interpreted-text role="doc"}).
Additionally, the configuration necessary to use the formgrader with
JupyterHub has changed, though it is now much less brittle (see
`/configuration/jupyterhub_config`{.interpreted-text role="doc"}).

The full list of merged PRs includes:

- PR \689: Add cwd to path for all nbgrader apps
- PR \688: Make sure the correct permissions are set on released
assignments
- PR \687: Add display\_data\_priority option to GetGrades
preprocessor
- PR \679: Get Travis-CI to build
- PR \678: JUPYTERHUB\_SERVICE\_PREFIX is already the full URL prefix
- PR \672: Undeprecate \--create in assign and autograde
- PR \670: Fix deprecation warnings for config options
- PR \665: Preventing URI Encoding of the base-url in the
assignment\_list extension
- PR \656: Update developer installation docs
- PR \655: Fix saving notebook in create assignment tests
- PR \652: Make 0.4.0 release
- PR \651: Update changelog with changes from 0.3.3 release
- PR \650: Print warning when no config file is found
- PR \649: Bump the number of test reruns even higher
- PR \646: Fix link to marr paper
- PR \645: Fix coverage integration by adding codecov.yml
- PR \644: Add AppVeyor CI files
- PR \643: Add command to update metadata
- PR \642: Handle case where points is an empty string
- PR \639: Add and use a Gradebook contextmanager for DbApp and DbApp
tests
- PR \637: Update conda channel to conda-forge
- PR \635: Remove conda recipe and document nbgrader-feedstock
- PR \633: Remove extra level of depth in schema per \ellisonbg
- PR \630: Don\'t fail `test_check_version` test on
`'import sitecustomize' failed error`
- PR \629: Update changelog for 0.3.1 and 0.3.2 PR \628: Make sure to include schema files
- PR \625: Add \"nbgrader db\" app for modifying the database
- PR \623: Move server extensions into their own directory
- PR \621: Replace tabs with spaces in installation docs
- PR \620: Document when needs manual grade is set
- PR \619: Add CI tests for python 3.6
- PR \618: Implement formgrader as a jupyterhub service
- PR \617: Add ability to show student names in formgrader
- PR \616: Rebuild docs
- PR \615: Display assignment list errors
- PR \614: Don\'t be as strict about solution delimeters
- PR \613: Update FAQ with platform information
- PR \612: Update to new traitlets syntax
- PR \611: Add metadata schema and documentation
- PR \610: Clarify formgrader port and suppress notebook output
- PR \607: Set instance variables in base auth class before running
super init
- PR \598: Conda recipe - nbextension link / unlink scripts
- PR \597: Re-submitting nbextension work from previous PR
- PR \594: Revert \"Use jupyter nbextension/serverextension for
installation/activation\"
- PR \591: Test empty and invalid timestamp strings
- PR \590: Processing of invalid `notebook_id`
- PR \585: Add catches for empty timestamp files and invalid
timestamp strings
- PR \581: Update docs with invoke test group commands
- PR \571: Convert readthedocs links for their .org -\> .io migration
for hosted projects
- PR \567: Handle autograding failures better
- PR \566: Add support for true read-only cells
- PR \565: Add option to nbgrader fetch for replacing missing files
- PR \564: Update documentation pertaining to the assignment list
extension
- PR \563: Add ability to switch between courses in assignment list
extension
- PR \562: Add better support to transfer apps for multiple courses
- PR \550: Add documentation regarding how validation works
- PR \545: Document how to customize the student version of an
assignment
- PR \538: Use official HubAuth from JupyterHub
- PR \536: Create a \"nbgrader export\" command
- PR \523: Allow code stubs to be language specific

Thanks to the following contributors who submitted PRs or reported
issues that were merged/closed for the 0.4.0 release:

- adamchainz
- AstroMike
- ddbourgin
- dlsun
- dsblank
- ellisonbg
- huwf
- jhamrick
- lgpage
- minrk
- olgabot
- randy3k
- whitead
- whositwhatnow
- willingc

0.3.x

0.3.3

with running `nbgrader fetch` on JupyterHub. The following PR was merged
for the 0.3.3 milestone:

- PR \600: missing sys.executable, \"-m\", on fetch\_assignment

Thanks to the following contributors who submitted PRs or reported
issues that were merged/closed for the 0.3.3 release:

- alikasamanli
- hetland

0.3.2

nbgrader on conda-forge.

- PR \608: Fix Windows tests
- PR \601: Add shell config for invoke on windows
- PR \593: Send xsrf token in the X-XSRF-Token header for ajax
- PR \588: `basename` to wordslist
- PR \584: Changes for Notebook v4.3 tests

Thanks to lgpage, who made all the changes necessary for the 0.3.2
release!

0.3.1

PostgreSQL and updates to the documentation. The full list of merged PRs
is:

- PR \561: Close db engine
- PR \548: Document how to install the assignment list extension for
all users
- PR \546: Make it clearer how to set due dates
- PR \535: Document using JupyterHub with SSL
- PR \534: Add advanced topics section in the docs
- PR \533: Update docs on installing extensions

Thanks to the following contributors who submitted PRs or reported
issues that were merged/closed for the 0.3.1 release:

- ddbourgin
- jhamrick
- whositwhatnow

0.3.0

notably, this includes:

- Windows support
- Support for Python 3.5
- Support for Jupyter Notebook 4.2
- Allow assignments and students to be specified in
`nbgrader_config.py`
- Addition of the \"nbgrader quickstart\" command
- Addition of the \"nbgrader extension uninstall\" command
- Create a nbgrader conda recipe
- Add an entrypoint for late penalty plugins

The full list of merged PRs is:

- PR \521: Update to most recent version of invoke
- PR \512: Late penalty plugin
- PR \510: Fix failing windows tests
- PR \508: Run notebook/formgrader/jupyterhub on random ports during
tests
- PR \507: Add a FAQ
- PR \506: Produce a warning if no coverage files are produced
- PR \505: Use .utcnow() rather than .now()
- PR \498: Add a section on autograding wisdom
- PR \495: Raise an error on iopub timeout
- PR \494: Write documentation on creating releases
- PR \493: Update nbgrader to be compatible with notebook version 4.2
- PR \492: Remove generate\_hubapi\_token from docs
- PR \490: Temporarily pin to notebook 4.1
- PR \489: Make sure next/prev buttons use correct base\_url
- PR \486: Add new words to wordlist
- PR \485: Update README gif links after docs move into nbgrader
- PR \477: Create a conda recipe
- PR \473: More helpful default comment box message
- PR \470: Fix broken links
- PR \467: unpin jupyter-client
- PR \466: Create nbgrader quickstart command
- PR \465: Confirm no SSL when running jupyterhub
- PR \464: Speed up tests
- PR \461: Add more prominent links to demo
- PR \460: Test that other kernels work with nbgrader
- PR \458: Add summary and links to resources in docs
- PR \457: Update formgrader options to not conflict with the
notebook
- PR \455: More docs
- PR \454: Simplify directory and notebook names
- PR \453: Merge user guide into a few files
- PR \452: Improve docs reliability
- PR \451: Execute documentation notebooks manually
- PR \449: Allow \--assignment flag to be used with transfer apps
- PR \448: Add \--no-execute flag to autogradeapp.py
- PR \447: Remove option to generate the hubapi token
- PR \446: Make sure perms are set correctly by nbgrader submit
- PR \445: Skip failures and log to file
- PR \444: Fix setup.py
- PR \443: Specify assignments and students in the config file
- PR \442: Fix build errors
- PR \430: Reintroduce flit-less setup.py
- PR \425: Enable 3.5 on travis.
- PR \421: Fix Contributor Guide link
- PR \414: Restructure user guide TOC and doc flow to support new
users
- PR \413: Windows support
- PR \411: Add tests for https
- PR \409: Make a friendlier development install
- PR \408: Fix formgrader to use course directory
- PR \407: Add \--no-metadata option to nbgrader assign
- PR \405: nbgrader release typo
- PR \402: Create a Contributor Guide in docs
- PR \397: Port formgrader to tornado
- PR \395: Specify root course directory
- PR \387: Use sys.executable to run suprocesses
- PR \386: Use relative imports
- PR \384: Rename the html directory to formgrader
- PR \381: Access notebook server of formgrader user

Thanks to the following contributors who submitted PRs or reported
issues that were merged/closed for the 0.3.0 release:

- alchemyst
- Carreau
- ellisonbg
- ischurov
- jdfreder
- jhamrick
- jklymak
- joschu
- lgpage
- mandli
- mikebolt
- minrk
- olgabot
- sansary
- svurens
- vinaykola
- willingc

0.2.x

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