Bidscoin

Most notable changes for this release:
- GUI upgraded from Qt5 to Qt6 -- now supporting the new Apple silicon
- A new `<<>>` dynamic run-index (default), that behaves the same as `<<1>>` when multiple runs are acquired, otherwise it is omitted/void (PR 195)
- Manpages (not on Windows)

The new BIDScoin v4 series is here!
With a lot of important improvements that should make your (and my) life significantly easier :-). The most notable changes are:

Added
- Support for BIDS 1.8.0
- Support for handling of non-alphanumeric characters in sub/ses prefixes
- A new (optional) pet2bids plugin
- A `skullstrip` tool (a bids-wrapper around FreeSurfer/synthstrip)
- A `slicereport` QC tool (a bids-wrapper around FSL/slicesdir)
- A unit/integration test & CI framework
- New Dockerfile and Apptainer/Singularity definition files to run BIDScoin in a container
- A BIDSCOIN_DEBUG environment variable to run bidscoin in a more verbose debug mode
- VERBOSE and SUCCESS logging levels
- Checks using the bids-validator python module
- Options to perform study/template bidsmap tests with `bidscoin -b / -t`
- Option to list and install template bidsmaps
- Many bugfixes, user interface improvements and tweaks

Changed
- The default behaviour is now to **not** unzip data in the sourcefolders anymore. Instead, users can use the `--unzip` option in the bidsmapper
- The spec2nii plugin is no longer added by default but is optional
- The dcm2niix2bids plugin no longer handles PET data (this is now handled by the pet2bids plugin)
- Removed BIDScoin's redundant/confusing `datatypes` option from the bidsmap
- Removed the obscure `participants` option from bidscoiner
- Major code refactoring

Enjoy!

Added
- Added support for the ABCD GE pepolar pulse sequence
- Use an orange bidsname font in the bidseditor for `.bidsignore` datatypes
- A (right-click) context menu in the bidseditor to import meta-data from disk into the meta-table

Changed
- Remove the DCCN-specific dcm2niix module usage in the bidsmap template
- Add `-l n` to the dcm2niix arguments to revert old UIN16 -> INT16 behaviour (otherwise fmriprep outputs are twice as large)
- No longer enforce BIDS compliance on `.bidsignore` datatypes

Fixed
- Sorting flat DICOM data (in a temporary working directory)
- The dcm2niix module (if not removed) raised an error that prevented handling dcm2niix suffixes

Added
- The usage of json sidecar files as a datasource for attribute values
- A template bidsmap for the [ScanSessionTool](https://github.com/fladd/ScanSessionTool)
- Usage of json sidecar files as an attribute source

Changed
- Dicomsort now searches recursively over the sessionfolder
- The dcm2niix2bids plugin now searches recursively for DICOM Series folders
- Images that have already been defaced are now skipped
- Prepend the rawfolder name & subprefix for more robust subject- / session-label filepath extraction

Fixed
- Pydeface not parsing subject / session labels from the filepath
- The non-HPC use of pydeface no longer requires DRMAA installation
- Account for `*` and `?` wildcards in the sub/ses prefixes in the bidsmapper
- Account for dynamic values with non-matching regular expressions (special thanks to Mateusz Pawlik)
- Various minor bugs

This is a quick fix for the installation error in BIDScoin 3.7.1

A point release that has however some really nice goodies, most notably:

* Support for BIDS 1.7 (e.g. for the new `B0FieldSource` and `B0FieldIdentifier` fieldmap meta fields)
* A new `nibabel2bids` plugin to convert a wide variety of source datasets to BIDS
* IntendedFor can now be appended with a "bounding" term to deal with duplicated fieldmaps from interrupted sessions
* The possibility to process subject folders without prefix

It should be a safe upgrade from 3.7.0