Vembrane

Latest version: v1.0.5

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0.12.0

Changes

- filter: better support for BNDs without "EVENTS" tag but with "MATEID" tedil (120)
- table: add `--long` option for long format tsv output (e.g. `vembrane table --long "CHROM, POS, FORMAT['DP'][SAMPLE]" in.vcf`) tedil (114)

Maintenance

- Simplify error types EQt (124)
- Mention possibility of `NA` in annotation. EQt (123)
- TypeVar instead of Any EQt (122)
- Some documentation improvements EQt (121)

0.11.2

Changes

- return `NA` in case of MISSING (".") ALT tedil (119)
- print the record itself in addition to the record index when encountering exceptions tedil (118)

Maintenance

- Minor formatting/Sort imports EQt (116)
- Make black and isort work together nicely tedil (117)

0.11.1

Changes

- Allow comparisons to `InfoTuple` tedil (115)

0.11.0

Changes

- Replace float constants in expressions with IEEE-754-1985 32bit float constants. tedil (111)
- `--overwrite-number` deprecated and replaced with `--overwrite-number-info` and `--overwrite-number-format` respectively tedil (112)
- Do not output records unconditionally when `--preserve-order` is activated tedil (113)
- docs: add `ID` to list of available fields in README.md dlaehnemann (109)

0.10.1

Changes

- pyproject.toml adjustments, bump patch version tedil (108)

0.10.0

Changes

- Update numpy version (to address dependabot warning) tedil (107). This requires `python >= 3.8`.
- Also update versions of other dependencies.

Chores

- update github actions to automatically consider all current python versions starting from 3.8 for testing

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