This is a patch release from v0.5.2 → v0.5.3.
Fixes
- Workspaces are now immutable
- ShapeFactor support added to XML reading and writing
- An error is raised if a fit initialization parameter is outside of its bounds (preventing hypotest with POI outside of bounds)
Features
Python API
- Inverting hypothesis tests to get upper limits now has an API with `pyhf.infer.intervals.upperlimit`
- Building workspaces from a model and data added with `pyhf.workspace.build`
CLI API
- Added CLI API for `pyhf.infer.fit`: `pyhf fit`
- pyhf combine now allows for merging channels: `pyhf combine --merge-channels --join <join option>`
- Added utility to download archived pyhf pallets (workspaces + patchsets) to contrib module: `pyhf contrib download`
Changes
- chore: Migrate to new way to set environment variables in GHA (1139)
- feat: Support ShapeFactor for import/export (1136)
- style: Adopt new JAX style of np and jnp (1135)
- docs: Add ss3L hepdata likelihood record (1133)
- fix: Use JAX v0.2.4+ API (1134)
- chore: Add file types for diff to .gitattributes (1130)
- fix: Fixed parameter naming for compatibility with ROOT import/export (1125)
- fix: Make workspaces immutable (1132)
- fix: Logic bug for outer joins of merge channels (1128)
- fix: Validate fit initialization parameters (1126)
- fix: Use functools.wraps with events.register to render docstrings (1124)
- docs: Use sphinx obj scope in docs by default (1122)
- feat: Merge channel functionality in pyhf combine (1088)
- ci: Make docs separate workflow (1120)
- refactor: Migrate contrib download to contrib module (1119)
- docs: Add importance of Issues to CONTRIBUTING.md (1113)
- refactor: Rename paramset.fixed to paramset.suggested_fixed (1110)
- feat: Add pyhf.workspace.build (1101)
- fix: Import all infer submodules (1104)
- docs: Use 1Lbb DOI in contrib download docstring (1109)
- fix: Remove improper defaults for contrib download (1105)
- docs: Add JSON example to README (1102)
- docs: Add CodeMeta JSON-LD Context File (1091)
- feat: Add API to download likelihood patchset archives (1046)
- fix: Avoid deprecation warnings due to invalid escape sequences (1047)
- docs: Add contributors to website (1095)
- docs: Remove fixed parameters caveat for TRexFitter in babel (1093)
- feat: Add test inversion / interval inference API (953)
- ci: Add code scanning CodeQL workflow (1085)
- test: Ensure continuous approximation of Poisson implemented (1084)
- chore: Migrate from bumpversion to bump2version (1083)
- docs: Add citations from 2019 and 2020 papers (1081)
- docs: Add information on announcement mailing list (1079)
- ci: Add workflow for nightly tests of notebooks (1078)
- ci: Add workflow dispatch support (1076)
- chore: Update GitHub Action releases and Python runtimes in CI (1074)
- ci: Add nightly tests using HEAD of dependencies (1071)
- fix: Restrict iminuit to v1.4.X releases (1070)
- chore: Migrate from pep517 to python-build (1066)
- refactor: Remove unused fixtures, refactor validation tests (1063)
- feat: Add fit to infer CLI API (1060)
- feat: Add erf and erfinv to tensorlib (1061)
- feat: Bump to modern pytest (6.0+) (1049)