Added - Indel calling for `medaka_variant`. - New models for MinION/GridION and PromethION paired to high accuracy an fast guppy basecallers. Changed - Overhaul of chunk handling and overlapping.
0.6.5
Bug fix release
Fixed - Fix Makefile for parallel build. - Ensure medaka consensus is given absolute path to model. Added - Tidy up some parsing and sorting of regions from strings. Changed - Disable by default validation of output HDF during consensus. - Refactor variant handling code.
0.6.4
Bug fix release
Fixed - Fix for models not specifiying data types.
0.6.3
Bug fix release
Fixed - Split pileup when reads do not span rather than silently deleting region. - Fix error in stitching occuring with a single region. Changed - Refactor handling of short and remainder regions. Removed - Drop 3.4 support.
0.6.2
Bug fix release
Added - Enhanced verification of training feature samples Changed - Pin pyyaml version
0.6.1
Bug fix release
Fixed - Fixed bug in `medaka_consensus` incorrectly calling python