+ Updates the raw quality calculation rule to ensure nothing is run in the background
1.1.10
+ Includes omitted samples in report's summary table + Lowers the number of BLAST hits from 25 to 12 (per query)
1.1.9
+ `mafft` replaces `clustalo` to carry out multiple sequence alignment + the report has been updated and now includes a sample count table + the ITS LCA method has been significantly sped up + the environment has been updated to reflect changes
1.1.8
+ annotate now supports wildcards in addition to directory for sample files + `download` subcommand was added to only download reference data + flat files included in report are now gzip compressed + files omitted include the number of paired sequences
1.1.7
+ updates fasttree command to use threaded `FastTreeMP` command
1.1.6
+ sets threads of trimming to 1/4 of total threads to optimize concurrent processing of samples through this IO bound task