Fmriprep

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This release incorporates Nipype improvements that should reduce the
chance of hanging if tasks are killed for excessive resource consumption.

Thanks to Elizabeth DuPre for documentation updates.

* DOC: Clarify how to reuse FreeSurfer derivatives (1189)
* DOC: Improve command line option documentation (1186, 1080)
* MAINT: Update core dependencies (1179, 1180)

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* ENH: Pre-cache DKT31 template in Docker image (1159)
* MAINT: Update core dependencies (1163)

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* ENH: Use Reorient interface included upstream in nipype (1153)
* FIX: Refine BIDS queries to avoid indexing derivatives (1141)
* DOC: Clarify outlier columns (1138)
* PIN: Update to niworkflows 0.4.0 and nipype 1.0.4 (1133)

1.0.x series (May 2018)
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* DOC: Add lesion masking during registration (1113)
* FIX: Patch ``boldbuffer`` for ME (1134)

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With thanks to ZhifangYe for contributions

* FIX: Non-invertible transforms bringing parcellation to BOLD (1130)
* FIX: Bad connection for ``--medial-surface-nan`` option (1128)

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With thanks to danlurie for the outstanding contribution of 1106

* ENH: Some nit picks on reports (1123)
* ENH: Carpetplot + confounds plot (1114)
* ENH: Add constrained cost-function masking to T1-MNI registration (1106)
* FIX: Circular dependency (1104)
* ENH: Set ``PYTHONNOUSERSITE`` in containers (1103)