Deeptrack

This release includes all the core code of DeepTrack 2.0.

This is a LEGACY RELEASE of DeepTrack2, which will be temporarily maintained to provide support and ensure compatibility for existing projects using TensorFlow. This release shall serve as a bridge for users transitioning to newer versions, enabling them to update their workflows at their own pace while still having access to critical fixes and updates.

Cite as:
Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Daniel Midtvedt, Giovanni Volpe.
"Quantitative Digital Microscopy with Deep Learning."
Applied Physics Reviews 8, 011310 (2021)

DeepTrack2 1.6.0 is a minor release that mainly adds WAE (both WAE-GAN and WAE-MMD) and provides some minor edits to the code of GAN and VAEs. Additionally, it mitigates the impact of `np.int` deprecation on `SampleToMasks` and some other features.

Cite as:
Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Daniel Midtvedt, Giovanni Volpe.
"Quantitative Digital Microscopy with Deep Learning."
Applied Physics Reviews 8, 011310 (2021)

DeepTrack2 1.5.6 is a patch that fixed an issue with the endothelial_vs dataset and an issue with repeated oneof-features.

Cite as:
Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Daniel Midtvedt, Giovanni Volpe.
"Quantitative Digital Microscopy with Deep Learning."
Applied Physics Reviews 8, 011310 (2021)

DeepTrack2 1.5.5 is a patch

Cite as:
Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Daniel Midtvedt, Giovanni Volpe.
"Quantitative Digital Microscopy with Deep Learning."
Applied Physics Reviews 8, 011310 (2021)

DeepTrack2 1.5.4 is a patch:
Fixed the reparameterization of VAEs to ensure proper computation.

Cite as:
Benjamin Midtvedt, Saga Helgadottir, Aykut Argun, Jesús Pineda, Daniel Midtvedt, Giovanni Volpe.
"Quantitative Digital Microscopy with Deep Learning."
Applied Physics Reviews 8, 011310 (2021)