2020-06-10 - reuse probabilities and minor allele dosage if computed previously - sped up minor allele dosage by avoiding numpy copy operation - can fetch variants within a genomic region if bgen index file is present
1.1.10
2020-06-04 - faster probabilities - sped up parsing probabilities by avoiding an integer multiplication - sped up parsing ploidy and missingness states - sped up setting sample IDs
1.1.9
2020-06-03 - minor fixes - sped up calculating minor allele dosage - simplified parsing genotype probabilities
1.1.8
2020-06-01 - minor fixes - sped up loading sample IDs from sample file - fixed BgenFile context handling - fixed bug with iteration if all variants loaded into memory - added unit tests for minor allele dosage
1.1.7
2020-05-28 - sped up parsing probabilities - calculates genotype probabilities from integer representation to float probability with multiplies, which can be faster than divides
1.1.6
2020-05-27 - minor fixes - sped up setting ploidy when all samples have same ploidy - sped up getting minor allele dosage by determining minor allele from subset of samples