Bgen

Latest version: v1.6.5

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1.5.5

sped up parsing phased probabilities when ploidy is constant

1.5.4

2023-04-03
- now can write bgen files in addition to reading
- faster decoding of zstd compressed genotypes by -O2 compiler option

v.1.4.1
2023-03-10
- added fast dosage code for aarch64 (ARM) hardware

1.4.0

2023-02-31
- added prebuilt windows packages
- avoid creating Variant objects multiple times in python
- fixed some compiler differences between linux and windows
- only open ifstream in binary mode to prevent file seeking differences on windows

1.3.1

2022-09-21
- handle if x86_64, but without AVX2
- add testing and package creation for macosx

1.3.0

2022-09-16
- capture and handle error while obtaining phased status if underlying data is not ready
- added method to get alt allele dosage from variant
- fixed issue if using dosage in numpy array after variant object is deleted

1.2.17

2022-06-03
- improved propagation of errors while reading data from filesystem

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