Tardis-sn

----------------

- Nothing changed yet.

----------------

New Features
^^^^^^^^^^^^
- the main feature is the re-write of the montecarlo code to C, which comes
with a 4x speed increase.

Pull Requests
^^^^^^^^^^^^^

- [210](https://github.com/tardis-sn/tardis/pull/210) a restructure of the C-file file structure (wkerzendorf, mklauser)
- [7](https://github.com/tardis-sn/tardis/pull/7) include .c in montecarlo/src/ for the randomkit files (mklauser)
- [209](https://github.com/tardis-sn/tardis/pull/209) Testing/pandas version info (wkerzendorf)
- [205](https://github.com/tardis-sn/tardis/pull/205) As simpler `run_tardis` (wkerzendorf)
- [206](https://github.com/tardis-sn/tardis/pull/206) Minor but critical fix to binary search (reverse) (ssim)
- [199](https://github.com/tardis-sn/tardis/pull/199) Gnuify cmontecarlo.c and cmontecarlo.h files (orbitfold)
- [203](https://github.com/tardis-sn/tardis/pull/203) Docs/reporting bugs (wkerzendorf)
- [201](https://github.com/tardis-sn/tardis/pull/201) A critical warning was added to the model indicating that no packet has left the simulation through the outer boundary. (mklauser)
- [200](https://github.com/tardis-sn/tardis/pull/200) added a new location for the atomic data. (wkerzendorf)
- [196](https://ggithub.com/tardis-sn/tardis/pull/196) New binary search added (mklauser)
- [169](https://github.com/tardis-sn/tardis/pull/169) fix for 168 (mklauser)
- [194](https://github.com/tardis-sn/tardis/pull/194) Setup/fix requirements (wkerzendorf)
- [188](https://github.com/tardis-sn/tardis/pull/188) A macro to automagically fix inline issues (orbitfold)
- [190](https://github.com/tardis-sn/tardis/pull/190) General/fixing unit problems (wkerzendorf)
- [179](https://github.com/tardis-sn/tardis/pull/179) making sure that if last_no_of_packets is not specified that it is set t... (wkerzendorf)
- [178](https://github.com/tardis-sn/tardis/pull/178) Atomic/fix reprepare (wkerzendorf)
- [177](https://github.com/tardis-sn/tardis/pull/177) added from_yaml and from_config_dict to ConfigurationNameSpace (wkerzendorf)
- [175](https://github.com/tardis-sn/tardis/pull/175) Fix a few problems in cmontecarlo.c (orbitfold, wkerzendorf)
- [174](https://github.com/tardis-sn/tardis/pull/174) fixes added for clang compile on mac (wkerzendorf)
- [171](https://github.com/tardis-sn/tardis/pull/171) Fix issues when using clang compiler (issue 170) (orbitfold)
- [167](https://github.com/tardis-sn/tardis/pull/167) fix for 165 (mklauser, wkerzendorf)
- [3](https://github.com/tardis-sn/tardis/pull/3) testing the new t_inner fix (wkerzendorf)
- [164](https://github.com/tardis-sn/tardis/pull/164) Config/toggle validation (wkerzendorf)
- [151](https://github.com/tardis-sn/tardis/pull/151) WIP Montecarlo C Rewrite (orbitfold)
- [160](https://github.com/tardis-sn/tardis/pull/160) how to get constant density? broken? (wkerzendorf)

------------------

Bugfixes
^^^^^^^^

- "print" replaced with logger for classical nebular
- logger statement added for coronal approximation
- warning added to documentation since plasma is out of date (temp
solution only) 108
- fix to binary search to deal with packets at end of line list
- warning added for density file readin outside tabulated range
- fix to NLTE solver (treats stimulated emission directly); tests included
- fix for zeta factor outside of temperature + test included [134, wkerzendorf]


New Features
^^^^^^^^^^^^
- added data_sources and version to `AtomData` set
- added atomic database table with downloads to documentation
- added more conversion routines for Species strings (e.g. Si IX) to util
- added new density models (power law and exponential) [mklauser]
- reimplementation of binary-search in C (towards faster/profileable code) [V. Jancauskas]
- added new astropy setup using astropy-helpers (thanks to embray and astrofrog for debugging help) [wkerzendorf 144]
- added a test that runs the full calculation and compares the spectrum output [wkerzendorf 144]
- added the new documentation validator [mklauser & wkerzendorf 134, 136]
- added a new configuration object for TARDIS [wkerzendorf 143]
- changed TARDISConfiguration -> Configuration [wkerzendorf 154]
- changed most small functions to C [V. Jancauskas 142]

------------------

New Features
^^^^^^^^^^^^

- bugfix release of TARDIS
- updated example section in the documentation
- now with working test coverage setup (https://coveralls.io/r/tardis-sn/tardis)


Bugfixes
^^^^^^^^

- missing ez_setup.py and setuptools_bootstrap.py included now
- reading of ascii density and abundance profiles
- several fixes in the documentation