Starseqr

Latest version: v0.6.7

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0.6.7

* General code cleanup and catches for some edge case scenarios.

0.6.6

* If no fusion transcript is identified skip primer generation. This was causing errors in some systems.

0.6.5

* Primer generation step was taking too long. Modified to search only 200bp on each side of breakpoint.

0.6.4

* Allow prefix to be a string or a full path. Helpful for writing outside of current working directory.
* Removed DNA functions as this has been deprecated for some time.

0.6.3

* fixed a filtering step that would die if all junctions were based on previous filtering

0.6.2

* Changed map multiprocessing to map_async which leads to overall better performance
* Filters mitochondria junctions earlier in the process which also imporoves performance
* symlink gtf into folder and make table locally rather than externally. Helpful for CWL
* changed memory to low requirement for pandas read_csv to avoid segfaults on large inputs
* use salmon "A" library type

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