Referenceseeker

Latest version: v1.8.0

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1.8.0

This is the 8th minor release (v1.8.0) introducing adjustable sliding windows.

New features:
- Implement adjustable sliding windows for the DNA fragment creation: 24

Improvements:
- fix RefSeq db build scripts: https://github.com/oschwengers/referenceseeker/commit/d662dc5f27194c7f2645f815b348408c5a677f16

1.7.3

This is a patch release:
- fixing several minor issues (19) regarding the creation of custom DBs
- adding more CI tests

1.7.1

This is a feature release providing:
- massively reduced database sizes due to compressed reference genomes
- allow for zipped input genomes
- new pre-compiled databases from GTDB and PLSDB

As well as:
- new tests
- move to Python 3.8 as default

As we currently have no infrastructure to test & debug the tool on MacOS, we skipped the integration tests on MacOS. Any suggestions/support is highly welcome.

1.6.4

This is a patch release fixing several DB creation issues.
- fixed an index issue upon unnamed DB records (13)
- fixed 3rd party binary paths upon DB imports
- update CI/CD scripts

1.6.3

This is just a minor patch to remove some debugging artifacts.

1.6.2

This is a minor release fixing broken 3rd party dependencies in the `share` directory. This issue is masked within a BioConda environment.

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