Reademption

- Fix issue with wrong behavior of fragment building and usage during gene quantification and coverage

- Fix zenodo web hook

- Change License from ISC License to MIT License

- Accelerate fragment building for paired-end reads
- Set color blind friendly colors for viz align plots

- Added multi-species analysis (changes the API)
- Results of subcommands separated by species
- Updated mapping statistics (e.g. count species-cross aligned reads)
- Include or exclude species-cross aligned reads in read counts and/or normalization
- Additional vizualisation for multi-species projects
- Template fragment building for paired-end reads
- Subcommands (for paired-end reads) use counts and/or normalization based on fragments or single reads
- Filter reads by template length
- Output folder creation only when calling the corresponding subcommands

- Fixed a bug of package creation, where the old build was not removed prior to cration