Changelogs » Napari-pyclesperanto-assistant

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Napari-pyclesperanto-assistant

0.11.6

New features
  * Better support for generating workflows using napari-time-slicer / napari-workflow-inspector. The assistant notifies the workflow manager now if it does something and the workflow manager records it properly, allowing code generation from the workflow inspector.
  
  See also https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#0112---december-5th-2021

0.11.5

Backwards compatible changes
  * Changed menu entries to cover finer differentiation between various filtering and segmentation techniquese

0.11.4

Bugfixes
  * Deployment: Too large wheels/files were packed

0.11.3

Bug fixes
  * contrast_limits were not in generated code

0.11.2

Bugfix
  * Generated code didn't work properly in 3D cases

0.11.1

New features
  * Integration of the napari-script-editor for easier script generation
  * The "Measure" button is back to the Assistant user interface giving easier access to tabular results data

0.11.0

New features
  * optional cupy backend in pyclesperanto-prototype 0.11.0 ([read more](https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#0110---november-16th-2021))
  * use table from napari-skimage-regionprops for showing statistical measurements

0.10.10

New features
  * Connected Component labeling in the Tools > Segmentation menu
  * Voronoi-Otsu-labeling in the Tools > Segmentation menu
  * Use the time-slicer for these two new function when processing timelapse data

0.10.9

Bug fixes
  * Copying and saving tables did't work (Thanks to Laura Žigutytė lazigu for reporting)

0.10.8

Bugfix:
  * Removed dyfunctional operations from the "Label processing" category
  
  See also:
  https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#0108

0.10.7

New features
  * New category: "Compare label images"
  * Example data is now longer distributed, it's downloaded from the internet (except blobs)

0.10.6

New features
  * Statistics of labeled pixels in Tools menu
  * Interactive table like in napari-skimage-regionprops
  * Added split-stack to Tools menu
  
  Bugfix:
  * Statistics table was freezing napari

0.10.4

Update release due to upstream bugfix: https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#0104---october-26th-2021

0.10.3

Bug fixes
  * Installation issues on MacOS (Thanks to Kevin Yamauchi kevinyamauchi for the PR!)
  * After removing layers, sometimes they reappeared

0.10.2

New features
  * Added entries to Tools menu
  
  Bug fixes:
  * Reset brightness/contrast didn't work on dask-backed image layers

0.10.1

New features:
  * DOI generation for releases on zenodo.org

0.10.0

New features:
  * Example data: blobs from ImageJ 🥳
  * GPU-backed label images can now be modified interactively in napari
  
  See also https://github.com/clEsperanto/pyclesperanto_prototype/releases/tag/0.10.0

0.9.10

Bugfix:
  * Revert to former menu structure to fix lost menus

0.9.9

New Features
  * Reorganized menu: Categories of "What" you can do are primary focus.
  * Utilitiy function for converting label layers to images and images to label layers
  
  See also https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#099---august-1st-2021

0.9.8

Bug fixes:
  * Right-click on `operation` pull-down made napari freeze
  
  Miscellaneous
  * Improved installation instructions for Windows. No command line needed anymore
  
  See also:
  * https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#097---july-15th-2021

0.9.6

Bugfixes:
  * The execution-order of chained operations was interrupted when the user changed the input-image of an operation.
  * The help-button was sometimes above the whole user interface. It was removed. You find the online help by right-clicking on the operations-pulldown instead.

0.9.5

* https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#095---july-11th-2021

0.9.4

New features:
  * Select-GPU dialog when starting the Assistant
  * Support for 4D-data by processing 3D stacks individually and updating when the user changes the time point slider
  * Function for turing a 3D image into a 2D+t stack
  * Renamed categories, e.g. "Background removal" -> "Remove background"
  * Reorganized categories: Better differentiation between label neighbor filters, label measurements and label-image measurements
  
  See also
  * https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#094---july-3rd-2021

0.9.2

See also https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#092---june-26th-2021

0.9.0

New features
  * User interface for measuring label statistics (in the menu)
  
  See also:
  * https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#090---may-16th-2021

0.8.0

New features
  * Show multiple dock widgets in napari 0.4.8
  * Moved menu entries to buttons in the assistant widget
  * Use dask under the hood to manage execution order of operations
  * New and more flexible user interfaces for the button grid
  * Push/pull images to/from GPU memory were minimized bringing improved performance, napari can have OCLArrays as layers since [pyclesperanto 0.8.0](https://github.com/clEsperanto/pyclesperanto_prototype/blob/master/docs/release_notes.md#080---apr-22nd-2021)
  
  Bug fixes
  * Operations are no longer executed twice when added
  * Some categories didn't show all parameters which were needed to configure the operations
  
  Backwards compatiblity breaking changes
  * Improved, simplified and easier extensible backend for categories
  * New code generators based on jupytext
  
  Special big thanks to Talley Lambert who made most of these!

0.7.6

Bug fixes
  * The user interface was confused when multiple operations of the same kind were executed. Thus, better handling of stateful operations attached to layers was implemented. Big thanks to Talley Lambert for suggesting how to fix that.
  
  Miscellaneous
  * A test was added to simulate a complex workflow executed in the CI.

0.7.5


        

0.7.4


        

0.7.3

Known issues
  * This release is not compatible with napari 0.4.7 and magicgui 0.2.7. Use napari 0.4.5 and magicgui 0.2.5 instead.

0.4.7