Musclex

Updates
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- fixed library constraints causing installation with versions of python >= 3.11 to fail when installing musclex with pip
- fixed library versions in setup.py causing tests to fail with pip version

Updates
- Implementation of background subtraction functions in Python, replicating fortran functions in QuadrantFolder

Updates
- Bug fixes (PT functionalities, QF and EQ bugs...)
- PT: Headless mode, center and rotation tools, interface improvements
- EQ: Rmax added to crop histograms and remove outside artifacts
- QF: ROI improvements
- H5 files processing improved : everything can be done directly on H5 files without converting
- Documentation update

Updates
- Bug fixes (Calib buttons, XV zoom, QF background subtraction and cache...)
- Memory leak fixed
- XV: Inpainting on the gaps available (experimental)
- EQ: Extra peak option added to improve fitting, Blank image and mask improved, Better interaction with its cache if the images are already processed
- PT: Blank Image and mask added, with mask threshold
- EQ, QF and DI Headless: Multiprocessing on folders
- Documentation update and performance reports on MuscleX

Updates
- Bug fixes (background substraction, installers...)
- New version of Add Intensities Multiple Experiments (former Add Intensities), easier to understand and use
- New version of Add Intensities Single Experiment (former Image Merger), easier to understand and use
- New module added to MuscleX: X-Ray Viewer, able to view images and h5 files easily, display a slice, a box, and play the file
- Double Zoom function added to all modules with calibration, and working with all buttons
- Documentation update

- Bug fixes (opencv to opencv-headless, UI bugs...)
- Now able to read and analyze hdf5 files (single or multiple images) without converting them to tiff
- "Save a compressed version of the image" checkbox (available when the function can produce an image)
- Improved hdf5 to tiff converter
- Testing available on all distributions (global testing only)
- Downloading the testing pickle files dynamically in order to make the software lighter
- Fix of mask threshold for Eiger images in quadrant folder
- Deep rearrangement of the code (pylint clean, folders and files rearranged)
- Documentation update (rootless Docker)