This version has been uploaded to PyPi: https://pypi.org/project/HPexome/
To install run
bash pip install hpexome
For more information see http://bcblab.org/hpexome/
1.0.0
In this version, hpexome efficiently process whole exame sequencing data, from aligned sequences (BAM files) to variant calling (VCF files) and joint genotyping (unified VCF file).