Hetnetpy

Upgrade package infrastructure (pre-commit checks, packaging, setup) and drop official Python 3.5 support.

This release is the first with the new package name `hetnetpy`. Users should now use `pip install hetnetpy` and `import hetnetpy`. `import hetio` will still work but will trigger a FutureWarning.

Final release before this package is renamed to hetnetpy from hetio. See <https://github.com/hetio/hetio/issues/40> for more information on the renaming. `import hetio` will raise a DeprecationWarning. Users are recommended to switch to hetnetpy or downgrade to v0.2.10 to avoid the warning.

There are no functional changes in this release.

May 2019 release with convenience functions and other enhancements.

Changes
-------

Consistent metanode/metaedge/metapath .abbrev property
https://github.com/hetio/hetio/pull/27

permute_pair_list: default to inplace=False
https://github.com/hetio/hetio/issues/28

Add construct_pdp_query to build cypher queries for PDP
https://github.com/hetio/hetio/pull/30
https://github.com/hetio/hetio/pull/33
https://github.com/hetio/hetio/pull/34
https://github.com/hetio/hetio/pull/36

Improve imports to be lazy / less likely to throw errors
https://github.com/hetio/hetio/issues/31
https://github.com/hetio/hetio/pull/32
https://github.com/hetio/hetio/pull/35

Migrate neo4j nomenclature to hetnet module
https://github.com/hetio/hetio/pull/37

is_symmetric method for metapaths
https://github.com/hetio/hetio/issues/38
https://github.com/hetio/hetio/pull/39

[](https://doi.org/10.5281/zenodo.1345765)

Relocate GitHub repository from dhimmel/hetio to hetio/hetio.

Changes

Support path-like obojectes in readwrite.
https://github.com/hetio/hetio/commit/21c64439a96326b67439d6e9bae89279c35e95ce

extract_all_metapaths: get all metapaths for any source/target metanodes
https://github.com/hetio/hetio/pull/14

sparsify_or_densify: workaround scipy float16 todense bug
https://github.com/hetio/hetio/pull/15

MetaGraph: metanode and metaedge getter methods
https://github.com/hetio/hetio/pull/18

MetaGraph: metagraph.get_metapath
https://github.com/hetio/hetio/pull/19

Optimize matrix.sparsify_or_densify
https://github.com/hetio/hetio/pull/20

graph.count_nodes & matrix.get_node_identifiers functions
https://github.com/hetio/hetio/pull/21

Enable edge/path sorting
Enable deterministic extract_metapaths ordering
https://github.com/hetio/hetio/pull/22

[](https://doi.org/10.5281/zenodo.1208646)

Add the hetio.matrix module for exporting edges to an adjacency matrix.