Graphtools

Latest version: v1.5.3

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1.5.3

What's Changed
* Deploy to PyPi on tagged release by scottgigante in https://github.com/KrishnaswamyLab/graphtools/pull/65
* Use `scipy.sparse.csgraph.shortest_path` by scottgigante in https://github.com/KrishnaswamyLab/graphtools/pull/66


**Full Changelog**: https://github.com/KrishnaswamyLab/graphtools/compare/v1.5.2...v1.5.3

1.5.0

Changeset:
* added `graphtools.estimator` abstract class: allows inheritance of basic takes-data-builds-graph functionality.

1.4.0

Changeset:
* added `knn_max` argument to `kNNGraph`
* increased test coverage
* restyled code with `black`

1.3.0

Changeset:
* `shortest_path` now works for all graphs with `data` and `affinity` distance metrics
* added automatic `n_pca` detection (thanks stanleyjs)
* changed default `decay` to 40
* renamed `kernel_symm='theta'` to `kernel_symm='mnn'`
* bugfixes

1.1.0

Changeset:
* Changed default value of `theta` for `kernel_symm='theta'` to 1 (was 0.5)
* Added `BaseGraph.to_pickle` and `graphtools.read_pickle` functionality for saving and storing graphs
* Improved warning message for many duplicate entries
* various bug fixes

1.0.0

Changeset:
* `knn` no longer includes self. Note that this change means that to reproduce a graph created with `graphtools v0.*`, you will need to reduce `knn` by 1.
* deprecated Python 2.7
* fixed some inefficient sparse matrix functions

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