Cancer-api

Latest version: v0.2.4

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0.2.3

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**Bugfixes**

- Fixed Travis auto-deploy to PyPI

0.2.2

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**Features and Enhancements**

- Implemented method to check for overlap with genomic region for SVs and SNVs
- Added ability to specify header, e.g., useful for reproducing VCF header

**Bugfixes**

- Fixed convert_files.py script to use new BaseFile methods

0.2.1

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**Bugfixes**

- Fixed (and renamed) method for getting file extension in BaseFile
- Generalized support for compression file extensions

0.2.0

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**Features and Enhancements**

- Added Factera file type and parser
- Added PavFinder VCF file type and parser
- Refactored BaseFile to be more consistent and stable
- Common instantiation method to ensure consistent attributes
- add_obj now checks if obj is a CancerApiObject
- Added buffersize option for files for autoflushing
- Converted files automatically write out to disk

**Bugfixes**

- Fixed bugs relating to file conversion

0.1.5

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**Bugfixes**

- Fixed uninitialized attributes in BaseFile

0.1.4

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**Features and Enhancements**

- Moved garbage collection (for reduced memory usage) to `clear_storelist` method

**Bugfixes**

- The files submodule would incorrectly append to the same file between different runs. This has been fixed.

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