Brie

Latest version: v2.2.2

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2.2.2

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* support limit the CPU threads used by tensorflow in brie-quant (default 6)

2.2.1

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* fix a bug for `--eventType=Any` in smart-seq
* change to setting for save to h5ad file for all events with only two-isoforms

2.2.0

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* **Big new feature** `brie-count` now supports cell barcodes based platforms,
including 10x Genomics
* provide small test files in the tests folder
* Update `brie-count` manual

2.1.0

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* Enable `brie-count` to support other types of splicing events, not only SE
* Fix a minor bug in exteme scenario with missing a certain isoform for all genes

2.0.6

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* Fix in format bug in brie-count
* Update brie.pl.volcano for using ELBO_gain as default y-axis
* Update manual according to the revised paper
* Add CLI ``brie``

2.0.5

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* Support saving detection table to tsv file
* Add the exon start and stop positions in brie-count

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